Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst4g00272 ATGGCACAAGAATCACCAACCCTGAAACTTCACCAACTCCTTCTCATATCTCCACCCCAAGACACTTCTCCAACCTCTCTTTCCTTCACCTTCTTCGACGTTCTATGGCTAAGGTTCCGCCCAGTTGAACGTCTTTTCTTCTACGAACTCCCAAACTCAACCATTTCATTCTTTGACACCATTCTTCCCAACCTCAAACACTCTCTTTCCCTCACACTCCAACACTTTCTCCCTCTCGCTGGCACCATCACATGGCCCCTTCACTCCCCCTTACCGTCCATAACCTACACCCCCGGAAACTCAATCACCTTCACAATTGCCGAATCTAACGCGGACTTCACCACCATCTCAGAATCCAACCACCGCCACCACCTGATCCCCCACTTAAGCATCTCACACGACCAGGCCTCTGTGTTAGCCCTCCAACTCACCCTTTTCCCCAACCAAGGCTTCTGCATCGGCATAACCTCGCACCACGCAGCCCTCGACGGAAAATCCTCCACCTTGTTCATCAAATCATGGGCACATCTCTGTTCCCACCTCAAAGACTCACATTCACCACCACCCCAACAACAACTGCCCAAGCATCTGACACCCTCGTTTGATAGATCCACGATAAAAGACCCTTCGGGGATCGGCGAAGTCTACGCGAACTCGTGGCTGAGCTTCGGAGGAGAGACCAACAATCGAAGCCTGCAGGTGTTGGAGTCCCTCAGCGAGACGGAAACCGATTTGGTCAAAGGAGTGTTCGTGCTTACGGCGGACAACATTAAAAAGCTGAAGAATTTGGTGCAGTCTAAGGTTGTCGAGAAGAACAAGGTTCGGGTTACGTCGTTTAGTGTCACGTGCGGGTACGTCGTGTGGTGTGCGGTTAGAGTGGGGGAAGGGGAGGGGGAGGGTGAGAGGGTGGTGTTTGTGTTCACGGTGGATTGTAGGTCACGCTTGGAGGATCCGGTGGAGGGAACGTACTTTGGAAACTGCGTTGTGCCGCGTTTGGTGGAGGTTAAGAGAGAGGAGGTGTTGGGGGATGAAGGGTTTGTGAAGTGTGTGGAAGGGATAAGTGAAGAGTTGAAGGAGGTCGAGGGTGGTGTGTTGAGTGGGGTGAAGGAGTGGTTTCTGAAGATTCAATCTGTGATGGGAGAAAGGTTGTTTTCTGTTGCAGGGTCACCAAGGTTTGAGGTTTATGGGGTGGATTTCGGGTGGGGAAGACCTAGGAGAGTGGATGTTCCTTCTGTCGATAAAACGGGGGCGTTTTCACTTTCCGAGAGTAGGGATGACGGTGGAGGGATTGAGATTGGGTTGGCCTTGAACAAGGATCGAATGGAAAAGTTTAAAACTTTTTTTTATCAAGGAATTTAA 1359 0.5092 MAQESPTLKLHQLLLISPPQDTSPTSLSFTFFDVLWLRFRPVERLFFYELPNSTISFFDTILPNLKHSLSLTLQHFLPLAGTITWPLHSPLPSITYTPGNSITFTIAESNADFTTISESNHRHHLIPHLSISHDQASVLALQLTLFPNQGFCIGITSHHAALDGKSSTLFIKSWAHLCSHLKDSHSPPPQQQLPKHLTPSFDRSTIKDPSGIGEVYANSWLSFGGETNNRSLQVLESLSETETDLVKGVFVLTADNIKKLKNLVQSKVVEKNKVRVTSFSVTCGYVVWCAVRVGEGEGEGERVVFVFTVDCRSRLEDPVEGTYFGNCVVPRLVEVKREEVLGDEGFVKCVEGISEELKEVEGGVLSGVKEWFLKIQSVMGERLFSVAGSPRFEVYGVDFGWGRPRRVDVPSVDKTGAFSLSESRDDGGGIEIGLALNKDRMEKFKTFFYQGI 452
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst4g00272 452 Pfam Transferase family 15 448 - -
Spst4g00272 452 PANTHER - 10 452 - -
Spst4g00272 452 Gene3D - 242 452 IPR023213 -
Spst4g00272 452 Gene3D - 12 232 IPR023213 -
Spst4g00272 452 SUPERFAMILY CoA-dependent acyltransferases 273 444 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst4g00272 Spst-Chr4 3001098 3002456 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst4g00272 15 450 Monolignol Biosynthesis Gene Families AT5G48930 23.620 6.56e-18 84.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst4g00272 - K13264 gmx:100127365 604.749