Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst4g00242 ATGGCAGAACCATCCACCGACCCCGCAACCGACCCTCCGCCGCCATTGACCAAAAGCTGGGCTGACGAAGCGGAGGAAGAAACTGACGCCTCCGCCTCCACCACTGCCACAGCCGCCGAAACCTCTTCTGTCAACCTCGACGCATTAAAAATCGAAGACAACGAGAGCCCTCCCAAACTCTTAGACGACCCCGACGATTCCAACATCCAAGCGGTTACTTCCGGAGAAACGCCATATACGTCGGCCGCGACGTTTGAGGACCTGAACCTCTCGCCGGAGCTACTGAAGGGGCTCTACGTGGAGATGAAGTTCCAGAAACCGAGCAAAATCCAGGCGCTAAGTTTGCCGATGATCCTGAGCCCGCCGCACCGGGACCTCATCGCGCAGGCGCACAACGGCTCTGGCAAGACCACGTGCTTCGTGCTCGGGATGCTCAGCCGCGTCGATCCCAAGCTGCAGGCGCCGCAGGCTCTTTGTGTCTGTCCCACCCGGGAGTTGGCTAATCAGAACATCGAAGTTCTCCGCAAGATGGGGAAGTACACCGGGATTGCGTCGGAGTGTGCTGTGCCGACTGATAGCACTGCCTCCTCGATCGCGAAAAGGGCGCCAGTTATGGCGCAGGTGGTAATTGGTACCCCTGGCACCATCAAGAAGTGGATGAGCTTCAAGAAACTCGGGGCCGCTAGGTTGAAGATTCTTGTTTTTGATGAGGCTGATCAAATGCTTGCTGAGTCTGGGCTTCTGTTGATTGCGCCTCTTTTGCAAACTGAGCATAGTGCTAACTAA 786 0.5674 MAEPSTDPATDPPPPLTKSWADEAEEETDASASTTATAAETSSVNLDALKIEDNESPPKLLDDPDDSNIQAVTSGETPYTSAATFEDLNLSPELLKGLYVEMKFQKPSKIQALSLPMILSPPHRDLIAQAHNGSGKTTCFVLGMLSRVDPKLQAPQALCVCPTRELANQNIEVLRKMGKYTGIASECAVPTDSTASSIAKRAPVMAQVVIGTPGTIKKWMSFKKLGAARLKILVFDEADQMLAESGLLLIAPLLQTEHSAN 261
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst4g00242 261 SMART ultradead3 103 259 IPR014001 -
Spst4g00242 261 MobiDBLite consensus disorder prediction 1 68 - -
Spst4g00242 261 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 117 261 IPR014001 -
Spst4g00242 261 PANTHER RNA HELICASE 41 244 - -
Spst4g00242 261 Pfam DEAD/DEAH box helicase 109 244 IPR011545 GO:0003676|GO:0005524
Spst4g00242 261 Gene3D - 61 256 IPR027417 -
Spst4g00242 261 ProSiteProfiles DEAD-box RNA helicase Q motif profile. 83 112 IPR014014 GO:0003724
Spst4g00242 261 MobiDBLite consensus disorder prediction 30 49 - -
Spst4g00242 261 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 69 244 IPR027417 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst4g00242 76 245 Eukaryotic Initiation Factors Gene Family AT1G72730 36.723 3.98e-26 103
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst4g00242 K18655 - gmx:100778091 359.377