Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst4g00236 ATGGAGGATAGGATGAAGAAGAGGGTGTTTTCACCGCCAATTCTGCTTCTCTTTCTAGCTTTCTCCTTTCTTCTCATGCTTCCCGAAGCCTCTGCTACAAAGTGGACAGTTGGCAACAGCCAGTTTTGGAACCCCAACATTAACTACACTGAATGGGCAAAAGGAAAACATTTCTACCTTGGAGATTGGCTCTATTTTGTGTATGATCGGAACCAAGCAAACGTGCTGGAGGTGAACCAGACCGATTATGAGACTTGTAACTCTGATCATCCACTCCAAAATTGGACTAGGGGTGCAGGTAGAGATGTGGTTCCACTGAACGTGACCAAAATTTATTACATCATCAGTGGCAAAGGGTTCTGCTTCAGTGGCATGAAGGTGGCTGTTCATGTCGAAAAGCTACCACCACCACCCAAAGCCGCCCCTGTAAAAGCCGGTGCGCCGACCCTCTTCTCCACCAGCCACATTCTTCTAACGCCGGTTGTTTTTGCCATCGGAGCAGCGTGGGATGCATTCATTCATTTCTGGTAG 531 0.4783 MEDRMKKRVFSPPILLLFLAFSFLLMLPEASATKWTVGNSQFWNPNINYTEWAKGKHFYLGDWLYFVYDRNQANVLEVNQTDYETCNSDHPLQNWTRGAGRDVVPLNVTKIYYIISGKGFCFSGMKVAVHVEKLPPPPKAAPVKAGAPTLFSTSHILLTPVVFAIGAAWDAFIHFW 176
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst4g00236 176 PANTHER BLUE COPPER PROTEIN 33 140 IPR039391 GO:0009055
Spst4g00236 176 Gene3D - 31 134 IPR008972 -
Spst4g00236 176 ProSiteProfiles Phytocyanin domain profile. 33 133 IPR003245 GO:0009055
Spst4g00236 176 SUPERFAMILY Cupredoxins 32 131 IPR008972 -
Spst4g00236 176 Pfam Plastocyanin-like domain 43 125 IPR003245 GO:0009055
Spst4g00236 176 FunFam Lamin-like protein 31 134 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst4g00236 Spst-Chr4 2620494 2622322 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst4g00236 10 176 Phytocyanin Superfamily AT5G15350 57.988 1.67e-69 206
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst4g00236 - - gmx:100305564 296.589