Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Spst4g00234 | ATGCATGGATTTGATGAAGTTTTCATGTTCGACAAAAGATACTACAATGTTCTGGAGGTGAACAAGACAAGCTACGAGAACTGCATAGACAGGGACTTCATAAGAAACCTGACACGAGGTGGTCGTGACGTGGTGCAGATGACGGAGGCAAGGACCTACTACTACCTCTCCGCTGGAGGGTACTGTTTCCATGGCATGAAAGTTGCTGTGCATGTTCAAGAACATCCTGCAATGGCACCAGCCCCATCATCATCATCATCATCATTCCTCATTGTCTCTGCTTCTCTTTTGCCCTCAGTGATGAGTTCCTGCATTTGGGTCATTGTTGTGGCCAATTTTCTTTATCACGTCAACTTGGTTTTCATGGATGGTTTCTAG | 378 | 0.455 | MHGFDEVFMFDKRYYNVLEVNKTSYENCIDRDFIRNLTRGGRDVVQMTEARTYYYLSAGGYCFHGMKVAVHVQEHPAMAPAPSSSSSSFLIVSASLLPSVMSSCIWVIVVANFLYHVNLVFMDGF | 125 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Spst4g00234 | 125 | Gene3D | - | 3 | 73 | IPR008972 | - | |
Spst4g00234 | 125 | ProSiteProfiles | Phytocyanin domain profile. | 1 | 74 | IPR003245 | GO:0009055 | |
Spst4g00234 | 125 | Pfam | Plastocyanin-like domain | 7 | 66 | IPR003245 | GO:0009055 | |
Spst4g00234 | 125 | PANTHER | BLUE COPPER PROTEIN | 5 | 82 | IPR039391 | GO:0009055 | |
Spst4g00234 | 125 | SUPERFAMILY | Cupredoxins | 7 | 72 | IPR008972 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Spst4g00234 | Spst-Chr4 | 2613587 | 2613964 | Proximal |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Spst4g00234 | 8 | 98 | Phytocyanin Superfamily | AT2G27035 | 43.956 | 4.43e-26 | 94.4 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Spst4g00234 | - | - | vra:106757590 | 153.68 |