Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst4g00224 ATGCAAAGAATAAAGCAACGGTTGTTGTTAAGAGTGGACAGGAAGAAGAGGGTAACAATGGCAGCTTTTGTGTTAACTGTGTCACAACACGGAACCGGACAATACCGGACGGTGCAGGAAGCCATAGACGCCGTGCCCCTCGGCAACACTCGCCGGACCGTCATTCGGGTGTCGCCGGGAACCTACCGGCAGCCCCTTTACGTGGCAAAGACTAAGAACTTCATCACCCTCGTTGGCCTATGCCCTGAGGACACTGTGCTCACTTGGAACAACACTGCCACCTCAATTCAACACCACAAGGATGCTAACATGATAGGGAGTGGAACCTTTGGATGTGGCAGCACCATTGTGGAAGGGAGTGACTTTATTGCTGAGAATATTACCTTTGAGAATTCTTCCCCTCAGGGTGCAGGGCAGGCAGTGACACTCAGAGTAACAGCAGATCGTTGTGCTTTCTATAATTGCAGTACTGCACTCTTGGAACATTGTCACATCCATTGCAAGTCCGCAGGGTTTATAACTGCACAGAGCAAAAACTCTCCACAGGAAAAAACTGGTTATGTATTCCTGAGATGTGTTGTCACAGGTGTTACGACTGGGTTTCGTCCATCCCAAAGAGTGAAATGGGCAGAAGAATTGAAGAATGAAGGAGCTGAGCAGTTTCGAGTCACACCTTCATTGATCCAGAATCAGACAGATCTTGACTTCCTCAAAGAATGA 720 0.4833 MQRIKQRLLLRVDRKKRVTMAAFVLTVSQHGTGQYRTVQEAIDAVPLGNTRRTVIRVSPGTYRQPLYVAKTKNFITLVGLCPEDTVLTWNNTATSIQHHKDANMIGSGTFGCGSTIVEGSDFIAENITFENSSPQGAGQAVTLRVTADRCAFYNCSTALLEHCHIHCKSAGFITAQSKNSPQEKTGYVFLRCVVTGVTTGFRPSQRVKWAEELKNEGAEQFRVTPSLIQNQTDLDFLKE 239
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst4g00224 239 Gene3D - 157 221 IPR012334 -
Spst4g00224 239 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 156 196 - -
Spst4g00224 239 Gene3D - 4 156 IPR012334 -
Spst4g00224 239 Pfam Pectinesterase 26 157 IPR000070 GO:0030599|GO:0042545
Spst4g00224 239 SUPERFAMILY Pectin lyase-like 19 210 IPR011050 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst4g00224 Spst-Chr4 2508552 2523658 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst4g00224 24 200 Carbohydrate Esterase AT5G07430 30.093 1.43e-25 100
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst4g00224 K01051 - gmx:100810259 317.005