Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst4g00197 ATGAAGCTTTTGGATGTTGGAACTGATGATGATGGTGTCCACATGATCGGGATCCATGGAATTGGTGGAATAGGAAAAACAACACTTGCTCTAGCAATTTCTAATTTGGTTGCTAACCATTTTGATGGTTTGTGTTTTCTTGAAAACGTGAGAGAAAACTCAGAAAAACATGGGTTACAACATCTCCAAAGCATTCTTCTATCTGAGATGGTTAAAGAAAAGAGAATAAACATGGCAAATGTGCAACAAGGAATTTCAATGATACAACATAGGCTTCAAGGAAGGAAGGTTCTCTTGATAGTGGATGATGTTGACAAGCAAGAGCAATTGCAGGCTATTGTTGGAAGATCTAATTGGTTTGGTTCCGGCAGCAGAATCATCATAACGACTCGAGATGAACAGCTGCTAGCATCTCATGAAGTTAAAAGAACATATGAGGTGCAGGAATTGAACAAGAATGATGCTTTTCAATTGCTTACATGGAAAGCTTTTAGAACAGAAGAATTTGATCCAAGTTATGAAGACGTAATGAATCATGTGATAGCTTATGCTTCTGGCCTTCCATTGGCTTTGGAAGTAATAGGTTCCAACTTGTTTGGAAAAAGTATAGAAGAATGGAAATCTGCTATCAAACAATATGAAAGAATTCCTAATAACCAAATCCTAAAGATACTTCAAGTAAGCTTTGATGCTTTGGAGGAAGAAGAGAAGAGTGTTTTTCTTGACATTGCTTGTTGTTTCAAAGGATATGAATTGGAAGAGGTCCAAGATATACTTCATGCTCATTATGGTGATTGCATGAGATATCATATTGGAGTGTTGGTTGATAAATCTCTCTTAAAGCTTAGTCTGCACGGTATGATGGTGACAATGCATGACTTGGTACAGGACATGGGTAAAGAAATTGTACGAAAGGAGTCACCGAAAGAGCCAGGGAAACGTAGCAGATTATGGTTCCATGAGGATATAATTCAAGTTTTAGAAGACAACACTGGAACTAGTGAAATTGAAATCATACGTCTGGATTTCCCCTTGCTGGACGCAGAAGAAATAGTAGAATGGAGCAGCAAGGCCTTCAAGAAGATGAGGAACCTCAAAACACTAATTATTAAAAATGGTAATTTTTCTAAAGGTCCCAAATATCTTCCAAACAGTCTAAGAGTACTAGAATGGTGGAGATATCCTTCACATGATTTACCATCCGATTTTCATTCAAAGAAACTTGCCATGTGCAAGTTACCTCAGAGTTGCTTTACATCATTTGAGTTGAAGTTCATGAGTATGAGATTTTTAAATTTGGACAAGAGTAAATGTTTAACACAGATACCTGATGTATCTGGTCTCCCAAATTTAGAAAAACTTTCATTTCAACATTGTCAGAATTTAACTACAATTCACAATTCCATTGGATTTTTATGTAAACTTAAAATATTAAGTGCTTTTGGTTGCACCAAGCTTGTGAGCTTTCCACCCATCAGGTTGAGCTCTCTTGAAAGGCTCAACCTCTCACGTTGTTATAGTCTCGAGAGTTTTCCAGAAATACTAGGAAAGATGGAAAACATAAGGGAACTTCAGTTGGAGTACACTGCCATAACGGAATTGCCATCTTCTTTTCAAAATCTTACTCGGCTTCAAGAGTTACAACTGTCTAACTGTGGAGTTGTTCAGTTACCAAGTAGCATTGTGATAATGCCAGAACTGACTGATCTTATTGGTTGGAAATGGAAAGGGTGGCGATGGCTAAAGCAGGAAGAGGATGAAGAAAAAGAGGAATCATCAATTGTATCTTCAAATGTAGAATCGCTTTGGGCCTCAGAATGCAACCTGTGTGATGATTTCTTCTCAATCGGTTTCATGCGCTTTGCTCATGTGAAAGACATAGACCTATCAAAGAATAATTTCACAATCCTTCCAGAATGCATCAAAGAGTTTCAATTTCTAAGGAAGCTTAAGGTGAATGATTGCGACCTTCTTAAGGAAATTAGAGGGATTCCACCAAACATGAAACATTTCTTAGCAACAAATTGTAAATCCTTGACTTCCTCAAGTACAAGCATGTTCCTAAATCAGGAACTACATGAGGCTGGAAAAACTCAGTTTTATTTACCAGGAGAAAGGGTTCCAGAATGGTTTGATCACCCAAGCAAGGGACCTTCAATTTCTTTCTGGTTTCGTAATAAGTTCCCAGGCAAGGTTCTTTGTCTTGTTATTGGACCTATGCATAATGATTCTGGAATGTTTAGGCCTAGGGTGATCATCAATGGCAATAAATGTTTCCTTGGTAGTGGCTATTTCATGATGGGAAGGGATCATACATATATTTTTGATCTTCAAACGATAGAATTTGAAGATAACTTATACGGAGTGCCTTTAGAAAATGAATGGAACCATGCAGAGGTTACATATGTTGGTTTGGAAGATACATCAATCCTTAAAGAAAGTAGAATCCATGTCTTCAAACAAGAAAGTAGCATGGAGGATACTAGGTTTTCTGATCCTTATGGCAAGAGAAAATTAGAAGATTATCCAAATAGTCTGGAATCACATAAACGACAACTGCTAAAAAAACATAGCTTTTTGGACATGGAAGTTTCATAG 2598 0.3726 MKLLDVGTDDDGVHMIGIHGIGGIGKTTLALAISNLVANHFDGLCFLENVRENSEKHGLQHLQSILLSEMVKEKRINMANVQQGISMIQHRLQGRKVLLIVDDVDKQEQLQAIVGRSNWFGSGSRIIITTRDEQLLASHEVKRTYEVQELNKNDAFQLLTWKAFRTEEFDPSYEDVMNHVIAYASGLPLALEVIGSNLFGKSIEEWKSAIKQYERIPNNQILKILQVSFDALEEEEKSVFLDIACCFKGYELEEVQDILHAHYGDCMRYHIGVLVDKSLLKLSLHGMMVTMHDLVQDMGKEIVRKESPKEPGKRSRLWFHEDIIQVLEDNTGTSEIEIIRLDFPLLDAEEIVEWSSKAFKKMRNLKTLIIKNGNFSKGPKYLPNSLRVLEWWRYPSHDLPSDFHSKKLAMCKLPQSCFTSFELKFMSMRFLNLDKSKCLTQIPDVSGLPNLEKLSFQHCQNLTTIHNSIGFLCKLKILSAFGCTKLVSFPPIRLSSLERLNLSRCYSLESFPEILGKMENIRELQLEYTAITELPSSFQNLTRLQELQLSNCGVVQLPSSIVIMPELTDLIGWKWKGWRWLKQEEDEEKEESSIVSSNVESLWASECNLCDDFFSIGFMRFAHVKDIDLSKNNFTILPECIKEFQFLRKLKVNDCDLLKEIRGIPPNMKHFLATNCKSLTSSSTSMFLNQELHEAGKTQFYLPGERVPEWFDHPSKGPSISFWFRNKFPGKVLCLVIGPMHNDSGMFRPRVIINGNKCFLGSGYFMMGRDHTYIFDLQTIEFEDNLYGVPLENEWNHAEVTYVGLEDTSILKESRIHVFKQESSMEDTRFSDPYGKRKLEDYPNSLESHKRQLLKKHSFLDMEVS 865
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst4g00197 865 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 3 597 IPR044974 GO:0006952
Spst4g00197 865 Gene3D Ribonuclease Inhibitor 329 575 IPR032675 -
Spst4g00197 865 Gene3D Ribonuclease Inhibitor 589 699 IPR032675 -
Spst4g00197 865 Gene3D - 1 144 IPR027417 -
Spst4g00197 865 SUPERFAMILY "Winged helix" DNA-binding domain 220 328 IPR036390 -
Spst4g00197 865 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 8 243 IPR027417 -
Spst4g00197 865 PRINTS Disease resistance protein signature 492 508 - -
Spst4g00197 865 PRINTS Disease resistance protein signature 184 198 - -
Spst4g00197 865 PRINTS Disease resistance protein signature 91 105 - -
Spst4g00197 865 PRINTS Disease resistance protein signature 15 30 - -
Spst4g00197 865 Pfam Leucine rich repeat 496 552 IPR001611 GO:0005515
Spst4g00197 865 Gene3D - 149 233 IPR042197 -
Spst4g00197 865 SUPERFAMILY L domain-like 308 685 - -
Spst4g00197 865 Pfam NB-ARC domain 9 219 IPR002182 GO:0043531
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst4g00197 Spst-Chr4 2222094 2225176 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst4g00197 13 570 WRKY Transcription Factor Family AT4G12020 33.733 3.93e-70 251
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst4g00197 - - gmx:100780257 1444.1