Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst4g00171 ATGGGGTTTGGGAGTAATGCAGTTCAAGCAGGGAGTTTGGATGTGGACAATTCAAAAGGCAGGAAGAACAAGGAAGGTGGTGGAAAGGAGAGAAAGTGGTGGTTTAGATTTAGCCTCTTTGGGAGTTGCATACCTTCAAGATCAAAAGTTGATAGCACCATTAGTGGCACTAGTGCTCCTAATAATGGTGAAAATGTCAAGTCAGTGATAACTGAATCAGAGCAAAACAAATCTGCATCTGATAAAATCACGAAGGAAGCAGCTCCTCCAGAGTCCTCTACAATAACTAGTGATGCTGAAAGTAACCCTTTGACTCCTATACACAGTGAGGAGTTGAAGGTTGCTTCTTGCTTGAGAAAATTCACATTCAATGGACTTAAGATGGCAACTAGGAATTTCAGACCAGAGAGTCTTCTTGGTGAGGGAGGGTTTGGTTGCGTCTTCAAGGGTTGGATTGAAGAGAAGGGAACTGCACCTGTGAAACCAGGCACCGGGCTTACGGTTGCGGTTAAGACCCTCAACCACAATGGACATCAGGGTCACAAGGAGTGGCTTGCTGAGTTAAATTATCTTGGTGATCTTGTCCATCCTAATCTTGTTAAACTGGTTGGTTTCTGTATTGAAGATGACCAAAGATTACTGGTTTATGAGTTTATGCCCCGCGGCAGTTTGGAGAACCACCTCTTTAGAAGACCCCTGCCTCTTCCTTGGTCTATCAGAATGAAAATTGCACTTGGTGCTGCAAACGGTCTTGCGTTTCTCCACGAAGAGGCTCAAAGACCCATAATATATCGTGATTTCAAAACATCTAATATACTATTAGATGCGGAATACAATGCCAAGCTTTCTGATTTTGGACTTGCCAAAGATGGTCCTGAGGGGGAAAAGACACATGTATCGACAAGAGTTATGGGAACATATGGTTATGCTGCTCCAGAGTATGTGATGACTGGACATTTGACATCAAAAAGTGATGTCTACAGCTTTGGAGTAGTGCTACTTGAAATGCTCACCGGCCGAAGATCTATTGACAAGAAAAGACCAAATGGGGAACACAATCTAGTCGAGTGGGCAAGACCTGTACTTGGAAACCGGCGGATGTTCTACAGGATAATTGACCCCCGCCTCGATGGCCATTTCTCGGTTAAAGGGGCACAAAAAGCTGTCCAGCTTGCTGCTCAGTGCCTGAGCCGTGATCCAAAATCCAGACCCTTGATGAGTGAAGTTGTTCAAGCTTTAAAGCCTTTGCCAAGCCTCAAGGACATGGCTATCTCATCTTATCACTTCCAGATTGCGCGAGTAGATCGAACCATGTCCATGCCTAATCATAAAAATGTCATTAGAACACAGCTAGTATCGGTGCCAAGGAAGGCTCAACCTGTAAGGACATTGTCTAGTCCAAATGTTCCACATGGTTCTCCTCATATTCAATATACCAAGTCTCCAAATCCTATGGGTAAGAATCACACTACACCATCTTTAGTTCGATGA 1491 0.4413 MGFGSNAVQAGSLDVDNSKGRKNKEGGGKERKWWFRFSLFGSCIPSRSKVDSTISGTSAPNNGENVKSVITESEQNKSASDKITKEAAPPESSTITSDAESNPLTPIHSEELKVASCLRKFTFNGLKMATRNFRPESLLGEGGFGCVFKGWIEEKGTAPVKPGTGLTVAVKTLNHNGHQGHKEWLAELNYLGDLVHPNLVKLVGFCIEDDQRLLVYEFMPRGSLENHLFRRPLPLPWSIRMKIALGAANGLAFLHEEAQRPIIYRDFKTSNILLDAEYNAKLSDFGLAKDGPEGEKTHVSTRVMGTYGYAAPEYVMTGHLTSKSDVYSFGVVLLEMLTGRRSIDKKRPNGEHNLVEWARPVLGNRRMFYRIIDPRLDGHFSVKGAQKAVQLAAQCLSRDPKSRPLMSEVVQALKPLPSLKDMAISSYHFQIARVDRTMSMPNHKNVIRTQLVSVPRKAQPVRTLSSPNVPHGSPHIQYTKSPNPMGKNHTTPSLVR 496
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst4g00171 496 Gene3D Transferase(Phosphotransferase) domain 1 219 433 - -
Spst4g00171 496 PANTHER OS01G0588500 PROTEIN-RELATED 83 416 - -
Spst4g00171 496 SUPERFAMILY Protein kinase-like (PK-like) 115 413 IPR011009 -
Spst4g00171 496 MobiDBLite consensus disorder prediction 460 496 - -
Spst4g00171 496 MobiDBLite consensus disorder prediction 87 104 - -
Spst4g00171 496 ProSitePatterns Protein kinases ATP-binding region signature. 139 171 IPR017441 GO:0005524
Spst4g00171 496 FunFam Probable serine/threonine-protein kinase PBL8 219 432 - -
Spst4g00171 496 MobiDBLite consensus disorder prediction 45 106 - -
Spst4g00171 496 ProSiteProfiles Protein kinase domain profile. 133 419 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst4g00171 496 Pfam Protein kinase domain 136 411 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst4g00171 496 Gene3D Phosphorylase Kinase; domain 1 117 218 - -
Spst4g00171 496 ProSitePatterns Serine/Threonine protein kinases active-site signature. 262 274 IPR008271 GO:0004672|GO:0006468
Spst4g00171 496 CDD STKc_IRAK 139 416 - -
Spst4g00171 496 MobiDBLite consensus disorder prediction 1 27 - -
Spst4g00171 496 MobiDBLite consensus disorder prediction 45 77 - -
Spst4g00171 496 FunFam Serine/threonine-protein kinase BIK1 100 218 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst4g00171 Spst-Chr4 1786254 1790289 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst4g00171 119 429 Glycoside Hydrolase AT3G07070 55.732 8.09e-116 345
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Spst4g00171 Pkinase 1.6e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst4g00171 - - gmx:100499647 863.603