Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst4g00168 ATGGGGACATCGCAAGGTATGGACGCTCTGAGACAAAAAGCGATCGTAGTCAAGGAGTCACTTCAGAAAGTCCAGACCATCACCGATAGCATGGTCTCCATTTTAGGCTCTTTCGATCATCGTCTCTCCGCACTCGAGACCGCCATGCGTCCCACTCAGATAAAAACGCATTCAGTTCGTCGATCACATGACAATATTGACAATACTCTAAAAGCAGCAGAGGGGATTTTGAAGCATTTCGACCAGACACGGACGGCGGAGACTAGAATACTTCGGGGCCCACACGAGGATCTAGAGAGCTATTTAGAAGCCATTGAGAAGTTGAAGGCAAATGTTCGTTTCTTTAGTGGTAAAAAGAACTTCAAATGTAGCGAGGGTATCATCAACCATGCTAATGGCTTGCTTGCCAAAGCTATCTCAAAGTTACAAGAGGAATTCAAACATCTTTTGACAAATTATAGTAAACCCGTGGAACCTGATTTCCTTTTCGAGTGCCTACCAAACTCTCTGAGGCCCTCAAACGCTGGGAAGCATGGTGAGGGTGGTGAAAAAACCCATCACGAAAAACAACGTTTAGAAGTTGTCACTTTCGCACTTCCAAATCTCCTTCCACCAAGTGTTATACCTTTGCTACATGATTTAGCACAAGAAATGGTTCAAGCTGGCCATCAGCAACAACTTTTTCGAATGTACAGAGATACCCGAGCTGCAGCGTTGGAACAAAGTCTTAGGAAGTTGGGTGTCGAGAGATTGAGTAAGGATGATGTTCAAAGAATGCAATGGGAGGTTTTGGAGGCAAAGATTGGAAATTGGATTCATTACATGAGAATTGCTGTCAAATTGTTAATTGCTGGAGAGAAGAAAATTTGTGATCAAATATTTGATGGTGTGGACTCTTTGAGAACCCAATGTTTTGCTGACCTCACTGCTAATAGTGTGGCTATGCTTCTCAGTTTTGGGGAGGCAATTGCGAAAAGCAAGAGGTCACCGGAGAAATTATTTGTTCTTCTAGACATGTATGAGATAATGAGAGAACTTCAACCAGAGATTGAGAAACTTTTTGAAAGTAAAGCATGCACTGAAATGCGAGAAGCTGCATTGAATTTGTCAAAGAGATTAGCTCAAACAGCCCAAGAAACCTTTGTTGATTTTGAGGAAGCAGTTGAGAAAGATGCCACCAAAACTACTGTTATGGATGGAACTGTGCACCCTTTAACTAGCTACGTGATCAATTACGTGAAATTTTTGTATGACTATCAATCAACCTTGAAACTACTTTTTCATGAGTTTGATCCCAATGATCCAGAAGGACAGTTAGCAATTATTACAACAAGGATTATGCAGGCTCTCCAAAGTAACTTGGATGGGAAATCAAAACAATATAAAGATCCAGCATTGACCCAGTTGTTTCTTATGAACAACATCCATTACATAGTGCGATCTGTAAGAAGGTCTGAGGCAAAGGACATGTTAGGGGATGATTGGGTGCAAATACATAGAAGAATTGTGCAACAACATGCAAATCAGTATAAAAGGATTTCTTGGGGAAAGATTTTACAATGTCTTACTGTCCAAGGAGGGGACAACAATAGTGGAGTCTCAAGAACAGTGATTAAAGACAGATTCAAGACCTTTAACGATCAAATTGAAGAGCTTCATGAAAGACAATCTCAATGGACTGTTCCTGACAGTGAATTGCGCGAATCTCTTAGATTGGCTGTTGCTGAAGTCTTGTTGCCTGCATATAGATCTTTCCTTAAACGTTTTGGGCCTATGATAGAGAATGGCAAAAATCCTTATAAATACATGGTATATTCTCCTGAACATCTTGAGCAAATGCTGGGTGAATTTTTTGAAAGCAAGATATGGAATGAACAAAAGCGATAA 1887 0.407 MGTSQGMDALRQKAIVVKESLQKVQTITDSMVSILGSFDHRLSALETAMRPTQIKTHSVRRSHDNIDNTLKAAEGILKHFDQTRTAETRILRGPHEDLESYLEAIEKLKANVRFFSGKKNFKCSEGIINHANGLLAKAISKLQEEFKHLLTNYSKPVEPDFLFECLPNSLRPSNAGKHGEGGEKTHHEKQRLEVVTFALPNLLPPSVIPLLHDLAQEMVQAGHQQQLFRMYRDTRAAALEQSLRKLGVERLSKDDVQRMQWEVLEAKIGNWIHYMRIAVKLLIAGEKKICDQIFDGVDSLRTQCFADLTANSVAMLLSFGEAIAKSKRSPEKLFVLLDMYEIMRELQPEIEKLFESKACTEMREAALNLSKRLAQTAQETFVDFEEAVEKDATKTTVMDGTVHPLTSYVINYVKFLYDYQSTLKLLFHEFDPNDPEGQLAIITTRIMQALQSNLDGKSKQYKDPALTQLFLMNNIHYIVRSVRRSEAKDMLGDDWVQIHRRIVQQHANQYKRISWGKILQCLTVQGGDNNSGVSRTVIKDRFKTFNDQIEELHERQSQWTVPDSELRESLRLAVAEVLLPAYRSFLKRFGPMIENGKNPYKYMVYSPEHLEQMLGEFFESKIWNEQKR 628
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst4g00168 628 Pfam Exo70 exocyst complex subunit 270 615 IPR046364 GO:0000145|GO:0005546|GO:0006887
Spst4g00168 628 PANTHER EXOCYST COMPLEX PROTEIN EXO70 57 619 IPR004140 GO:0000145|GO:0006887
Spst4g00168 628 SUPERFAMILY Cullin repeat-like 76 619 IPR016159 -
Spst4g00168 628 Gene3D Exocyst complex component Exo70 75 628 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst4g00168 Spst-Chr4 1744754 1757558 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst4g00168 1 628 EXO70 exocyst subunit family AT5G52340 76.108 0.0 1004
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst4g00168 K07195 - gmx:100779774 1118.22