Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst4g00151 ATGAGAGTGATGGGAGAACTGTGGTCTCAGCTAGGCTCACTCATGGCTAGCTTCATGTTTGTGTATGCCATCTATGAGCAATTCTTTCCACGCCATCTTCGGATCTATGTCAAAAAATACACACAAAAATTCACAGGCTTGATGTACCCTTACATCCAAATCTCTTTCTCTGAGTTCTCAGGAGAACGGTTGAAGAGAAGTGAAGCATACACTGCCATAAGAACCTACCTCAGTGCAAACTCATCACAGAGAGCCAAAAGGCTCAAAGCTGATGTGGTGCAGGATAGTCAAAACCCACTCATCCTCTCTATGGACGACAATGAAGAGATCACAGATGAGTTCCACGGTGTCAAACTGTGGTGGAGTGCAAACTACACTCTCCCAAAAACACAGTCATTCTCATTTTACCCTACTTCAGAAGAGAAGAGGTTTTTAACCCTAACGTTCCACAAGCGCCACCGTGACCTCATCACTGGCTCTTACATCCAACATGTTTTGAAAGAAGGAAGGGCTATTGCAGTTCGGAATAGAACACTGAAGTTGTACACCAACAACCCCAGCAATGATTGGTATGGCTACAAACGCAGCAAGTGGAGTCATGTTAACTTTGAGCACCCTTCAAGGTTTGAGACTCTTGCAATGGATCCAAAGAAGAAGGAAGAGATTGTCAACGACCTTGTTAGGTTCAAGACAGGAAAAGAGTATTATGCTAAAGTTGGAAAGGCTTGGAAGAGAGGGTACTTACTCTATGGTCCCCCAGGAACTGGGAAGTCAAGCATGATAGCTGCTATGGCTAATTTCATGAACTATGATGTGTATGATCTTGAACTCACAGCAGTGAAGGAAAACACTGAGTTAAGGAAGCTGTTGATTGAAACATCAAGCAAGTCCATTATAGTGATTGAGGACATTGATTGCTCCCTTGATCTCACTGGCCAAAGGAAGAAGGAGAAGGAGAAGGAGAAAGATGAGGATGAGGAGAAACCAAAGAATCCTTCCAAGAAAGCAGAAGAAGAAGATAAGAAGGCAAGCAAGGTGACTCTCTCAGGGCTGTTGAATTTCATCGATGGAATTTGGTCAGCATGTGGTGGAGAGAGGATCATAATCTTTACAACAAACTTTGTGGAGAAACTTGATCCTGCTCTCATAAGGAGGGGAAGGATGGACAAGCACATAGAAATGTCATATTGTGGTTATGAAGCATTCAAGGTGCTGGCAAAGAACTACTTGGAGGTTGAGTCTCACAGTTTGTTTCCTACCATTGGCAGGTTGCTGGGAGAGACCAATATGTCACCTGCTGATGTAGCTGAGAATCTAATGCCTAAGACAGTTGTGAATGATTCTGAAATTTGCTTGCAGAGTCTGATAGAGTCTCTTGAGGAGGCCAAAAAGAAGGCAGAAGAGGAAGCAGAGAAAAAGGCCATGGAGGAGGCAAGGTTGAAGGAAGAGAATGAAAAGCTTGAAGCTACTGGAAAATCTGCAGAAGAGGTGAAGGAAAATGGCACAGTCCATTAA 1515 0.4363 MRVMGELWSQLGSLMASFMFVYAIYEQFFPRHLRIYVKKYTQKFTGLMYPYIQISFSEFSGERLKRSEAYTAIRTYLSANSSQRAKRLKADVVQDSQNPLILSMDDNEEITDEFHGVKLWWSANYTLPKTQSFSFYPTSEEKRFLTLTFHKRHRDLITGSYIQHVLKEGRAIAVRNRTLKLYTNNPSNDWYGYKRSKWSHVNFEHPSRFETLAMDPKKKEEIVNDLVRFKTGKEYYAKVGKAWKRGYLLYGPPGTGKSSMIAAMANFMNYDVYDLELTAVKENTELRKLLIETSSKSIIVIEDIDCSLDLTGQRKKEKEKEKDEDEEKPKNPSKKAEEEDKKASKVTLSGLLNFIDGIWSACGGERIIIFTTNFVEKLDPALIRRGRMDKHIEMSYCGYEAFKVLAKNYLEVESHSLFPTIGRLLGETNMSPADVAENLMPKTVVNDSEICLQSLIESLEEAKKKAEEEAEKKAMEEARLKEENEKLEATGKSAEEVKENGTVH 504
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst4g00151 504 SMART AAA_5 243 398 IPR003593 GO:0016887
Spst4g00151 504 Pfam Domain associated at C-terminal with AAA 29 123 IPR025753 -
Spst4g00151 504 Coils Coil 449 500 - -
Spst4g00151 504 ProSitePatterns AAA-protein family signature. 366 385 IPR003960 GO:0005524|GO:0016887
Spst4g00151 504 MobiDBLite consensus disorder prediction 463 504 - -
Spst4g00151 504 CDD RecA-like_BCS1 222 394 - -
Spst4g00151 504 PANTHER BCS1 AAA-TYPE ATPASE 10 468 - -
Spst4g00151 504 Pfam ATPase family associated with various cellular activities (AAA) 248 395 IPR003959 GO:0005524|GO:0016887
Spst4g00151 504 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 103 468 IPR027417 -
Spst4g00151 504 Gene3D - 393 461 - -
Spst4g00151 504 Coils Coil 308 328 - -
Spst4g00151 504 Gene3D - 196 392 IPR027417 -
Spst4g00151 504 FunFam AAA-ATPase ASD, mitochondrial 199 392 - -
Spst4g00151 504 MobiDBLite consensus disorder prediction 313 341 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst4g00151 Spst-Chr4 1473436 1474950 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst4g00151 187 476 Miscellaneous Gene Families AT3G02450 26.421 1.78e-10 61.6
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst4g00151 4 1473436 1474950 Spst1g01282 1 15523466 15524995 PCT