Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst4g00124 ATGCCCAACGATCCACAAGCTCAAATGGATTTTGTTCTAAATTACCTCAATTCCACTACCATTGGACTTCTTTCTCTAATTCTCTTCTGTTTATTTTTGTATAATCCCTTCAAATTTTTTCAAAGAAATGAGGCTCCCACAGTTGCAGGTGCCTGGCCAATACTTGGTCACGTTCTATTGCTGAGTGGATCACAAACACCCCACAAAACCTTGGGTGCTTTGGCTGACAAATATGGACCCATTTTCAGCATCAAATTTGGTTCCAAAAAGGCTTTGGTAATCAACAAATGGGAAATAGCAAAGGAATGTTTCACCACAAACGACACGGTCGTTTCCTCTCGCCCCAAGCTTGTTGCCGTTGAACACTTGACCTACAACCAAACCATGTTTGGGTTTGCACCCTATGGTCCATATTGGCGTGAAATAAGAAAGATTGCAACTTTAGAGATCCTCTCTAGTCGCCGAGTGGAGAAGCTGCAGCATGTTCGAGTCTCAGAAGTTCAGAACTCCATCAAAGAGCTTTATAATCTTTGGTGTAGCCAAAAGAACGAGTCTGGCTATGTGTTGGTGGAGCTGAAGCAATGGTTTTCTCACTTGGCTTTCAACATGGTTTTCCGAATGGTCGTTGGGAAGCGATATTTCGGGGTTGACAACGTGGATGATGAGAAGGCACAGAGATGTGTGAAGGCTGTGGATGAACTCATGCGTCTGTTGGGGGTGTTCACAGTGGGAGATGCTATTCCTTGGTTGAGATGGTTTGATTTTGGAGGCCATGAGAAGACCATGAAAGAAACTGCCAAGGAATTGAATTGTATTTTAAGTGAGTGGTTAGAGGAACACAGACAACACAAGAGTTTGGGTGAAGAGGTTGATGGAGATCAAGATTTCATGGATGTGATAATTTCCCTGCTTGATGGAAGAACAATTGATGGGGTAGATGCAGATACTATGATCAAATCCACTGTACTGGCGGTAATTGCAGGAGGAGCCGACACAAGTAATACTGTTCTTACATGGGCAATATGTTTGATTTTGAGAAACCCTTCGGTATTGGAAAATGCTAAAGCTGAATTAGACATTGAAGTTGGAAAAGATAAATGCATAAGTGAGTCTGATATAAGTAAGTTGATATACCTTCAAGCCATAGTGAAAGAAACTTTAAGATTGTATCCTCCTGGTCCTCTCTCGGGACCTCGTGAATTCACAGAGAATTGCATTTTAAGTGGCTATAATATAAAAAAAGGAACTCGTTTGATCACAAATCTTTGGAAGATTCACACAGATCCTAGTGTTTGGTGGGATCCGTTGGAGTTCAAACCAGAAAGGTTTCTTACCACACACAAAGATATTGACATCAATGGTCGTCATTTTGAGCTATTACCATTTGGAAGTGGTAGAAGAATGTGTCCTGGAATATACTTTGGCCTTCAAATGGTGCATTTAACTCTTGCTACTTTTCTGCATTCTTTTGAAATTTCAAGTCCATCAAATGCTCCTATTGACATGTCCGAAACCTTTGGATTAACCAACACCAAAACCACTCCCCTTGAGATTCTTATTAAACCACGTCTATCTCTTACTTCTTATGTATGA 1593 0.4099 MPNDPQAQMDFVLNYLNSTTIGLLSLILFCLFLYNPFKFFQRNEAPTVAGAWPILGHVLLLSGSQTPHKTLGALADKYGPIFSIKFGSKKALVINKWEIAKECFTTNDTVVSSRPKLVAVEHLTYNQTMFGFAPYGPYWREIRKIATLEILSSRRVEKLQHVRVSEVQNSIKELYNLWCSQKNESGYVLVELKQWFSHLAFNMVFRMVVGKRYFGVDNVDDEKAQRCVKAVDELMRLLGVFTVGDAIPWLRWFDFGGHEKTMKETAKELNCILSEWLEEHRQHKSLGEEVDGDQDFMDVIISLLDGRTIDGVDADTMIKSTVLAVIAGGADTSNTVLTWAICLILRNPSVLENAKAELDIEVGKDKCISESDISKLIYLQAIVKETLRLYPPGPLSGPREFTENCILSGYNIKKGTRLITNLWKIHTDPSVWWDPLEFKPERFLTTHKDIDINGRHFELLPFGSGRRMCPGIYFGLQMVHLTLATFLHSFEISSPSNAPIDMSETFGLTNTKTTPLEILIKPRLSLTSYV 530
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst4g00124 530 Gene3D Cytochrome P450 40 527 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst4g00124 530 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 462 471 IPR017972 GO:0005506|GO:0016705
Spst4g00124 530 PRINTS E-class P450 group I signature 380 398 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst4g00124 530 PRINTS E-class P450 group I signature 99 120 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst4g00124 530 PRINTS E-class P450 group I signature 317 334 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst4g00124 530 PRINTS E-class P450 group I signature 469 492 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst4g00124 530 PRINTS E-class P450 group I signature 75 94 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst4g00124 530 PRINTS E-class P450 group I signature 199 217 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst4g00124 530 PRINTS E-class P450 group I signature 337 363 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst4g00124 530 PRINTS E-class P450 group I signature 421 445 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst4g00124 530 PRINTS E-class P450 group I signature 459 469 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst4g00124 530 PANTHER CYTOCHROME P450 82C3-RELATED 29 529 - -
Spst4g00124 530 SUPERFAMILY Cytochrome P450 51 523 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst4g00124 530 PRINTS P450 superfamily signature 381 392 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst4g00124 530 PRINTS P450 superfamily signature 460 469 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst4g00124 530 PRINTS P450 superfamily signature 328 345 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst4g00124 530 Pfam Cytochrome P450 49 510 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst4g00124 530 FunFam Cytochrome P450 82C4 38 521 - -
Spst4g00124 530 CDD CYP82 79 523 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst4g00124 Spst-Chr4 1238022 1249543 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst4g00124 45 530 Cytochrome P450 AT4G31940 51.012 0.0 535
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst4g00124 - - gmx:100805047 826.239