Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst4g00122 ATGGACTTTCTCCAAAATTGCTTAACCTTAAACATCACTACTTTTATTGTATCCTTCCTTTCTCTAAACTTCATATTTTTCTATCTGTATCGTAGAAATTCTCGTGGAAAACAGGCTCCAATAGTGAAAGGTGCATGGCCAATACTTGGTCATCTTTCACTGCTAAATGGATCACAAACACCACATAGAACTTTGGGTGCTTTGGCTGACAAGTATGGACCATTGTTCACCATCAAGCTAGGTGTGAAGAAGGCTTTGGTGGTCAGCAACTGGGAAATGTCCAAGGAACTCTTCACCACAAACGACCTTGCGGTTTCATCACGCCCCAAACTCGTTGCCGTGGAAGTCATGTCATACAACCAAGCTTTTATAGGGTTGTCACCATATGGACCCTATTGGCGAGAGCTTCGAAAGATTGTGACTTTAGAGTTTCTCTCCAACCGCAGAATAGAGAAACTCAGCCACATTCGTGTCTCAGAGGTTCAAACCTCACTCAAAGAGCTCTTCAATTTGTGTTATACTAGCGTAAACAAGAAGGAGAATGAATCTAGTTACGGTACTACTACTTTGGTGGACATGAAAGAGTGGTTTTCACATTTGACTTTCAACATGGTAGTGAGGATGGTGGTGGGGAAGAGGTACTTCGGTGTGGTGCATGTGGAGGGAAAGGAGAAGGCAGAAAGTTTTATGAGGAACATAAGGGAGTTCATGAATTTGATGGGGACTTTCACTGTGGCTGATGGGGTTCCTTGTTTGAGGTGGTTGGATTTAGGGGGCCATGAGAAGGCCATGAAAGCAACGGCTAGGGAAATGGACAAGCTTTTGAGTGAGTGGTTGGAGGAGCACCAAGAGAAGAGGGTTAAGGGCGATCGAGACTTCATGGATTTGATGATTTCAGCACTTAATGGGGCTCAGATTAATGGGTTTGATGCTGACACCATATGCAAAGCCACTACCCTGGAATTGATTTTGGGTGGAACTGATTCAACTGCTGTTACTCTTACATGGGCACTTAGTCTGCTATTGCGAAATCCTCTTGCAATGGAAAAGGTTAAAGAAGAAATTGACATGAATGTTGGCAAAGATGGATACATAAGAGAGTCAGATACAAGCAAACTCGTGTATCTTCAAGCTATAGTTAAAGAGACATTAAGATTGTATCCACCAGCACCTCTTTCATCACCTCGTGAATTCACAGAAAATTGCACCTTAGGTGGCTACCACATCAAAAAGGGAACTAGACTTTTGCATAACTTGTGGAAGATCCACAGAGATCCTAGTGTTTGGTCCGATCCATTAGAATTTAAACCAGAAAGGTTCCTCACCACTCACAAAGATGTTGATCTTAGGGGTCACCATTATGAGTTGTTACCCTTTGGAAGTGGGAGAAGAGTTTGTGCTGGAATGTCCCTTGGCTTAAACATGGTCCATTTCACTTTGGCTAATTTGTTGCATTCCTTCGACATATTGAATCCTTCGGCTGAACCTATTGACATGACTGAGATATTTGGATTTACCAACACTAGAGCTACTCCACTTGAGGTTTTGATTTTCTCAAGGAAAAGAGGCTCCCACAGTTGCAGTGCATGGCCAATACTTGGTCACCTTCCATTGCTGAGTGGTTCAAAGACACCCCGTAGAACTTTGGGTGCTTTGCTCGACAAATATGGACCAATATTCACCGTCAAACTTGGTGCAAAAAAGGTTTTGGTAATCAACAACTGGGAAATAGCAAAGGAACGCTTCACTATTAATGACAAAGTCGTTTGCTCTCCCCCCAAGCTTGCTGCCATTGAACACATGACCTACAACCAAGCAATGTTTGGCTTTGCGCCCTACGGTCCCTATTGGCGACAACTAAGAAAAATTATAATTTCTGAGATCCTCTCCCCGCATCGAGTGAATCAACTACGGCATACTTTTGAGTCAGAAGTTCAAGGTTCGATCAAAGAGCTCTTTAACTTTTGGTGTGGTAGCAAAAGGAATGAGTCTGGCTATGTATTGGTGGAGTTGAAGCAATGGTTTTCTCATTTGATGTTCAACATTGTTCTTCAAGTGGTCATAAGGAAGAGATATTATGGATGA 2085 0.4269 MDFLQNCLTLNITTFIVSFLSLNFIFFYLYRRNSRGKQAPIVKGAWPILGHLSLLNGSQTPHRTLGALADKYGPLFTIKLGVKKALVVSNWEMSKELFTTNDLAVSSRPKLVAVEVMSYNQAFIGLSPYGPYWRELRKIVTLEFLSNRRIEKLSHIRVSEVQTSLKELFNLCYTSVNKKENESSYGTTTLVDMKEWFSHLTFNMVVRMVVGKRYFGVVHVEGKEKAESFMRNIREFMNLMGTFTVADGVPCLRWLDLGGHEKAMKATAREMDKLLSEWLEEHQEKRVKGDRDFMDLMISALNGAQINGFDADTICKATTLELILGGTDSTAVTLTWALSLLLRNPLAMEKVKEEIDMNVGKDGYIRESDTSKLVYLQAIVKETLRLYPPAPLSSPREFTENCTLGGYHIKKGTRLLHNLWKIHRDPSVWSDPLEFKPERFLTTHKDVDLRGHHYELLPFGSGRRVCAGMSLGLNMVHFTLANLLHSFDILNPSAEPIDMTEIFGFTNTRATPLEVLIFSRKRGSHSCSAWPILGHLPLLSGSKTPRRTLGALLDKYGPIFTVKLGAKKVLVINNWEIAKERFTINDKVVCSPPKLAAIEHMTYNQAMFGFAPYGPYWRQLRKIIISEILSPHRVNQLRHTFESEVQGSIKELFNFWCGSKRNESGYVLVELKQWFSHLMFNIVLQVVIRKRYYG 694
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst4g00122 694 Pfam Cytochrome P450 45 500 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst4g00122 694 Pfam Cytochrome P450 529 692 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst4g00122 694 PRINTS E-class P450 group I signature 334 360 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst4g00122 694 PRINTS E-class P450 group I signature 456 466 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst4g00122 694 PRINTS E-class P450 group I signature 466 489 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst4g00122 694 PRINTS E-class P450 group I signature 314 331 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst4g00122 694 PRINTS E-class P450 group I signature 69 88 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst4g00122 694 PRINTS E-class P450 group I signature 93 114 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst4g00122 694 PRINTS E-class P450 group I signature 418 442 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst4g00122 694 PRINTS E-class P450 group I signature 377 395 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst4g00122 694 PRINTS E-class P450 group I signature 200 218 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst4g00122 694 FunFam Cytochrome P450 82C4 29 518 - -
Spst4g00122 694 Gene3D Cytochrome P450 30 525 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst4g00122 694 CDD CYP82 73 520 - -
Spst4g00122 694 SUPERFAMILY Cytochrome P450 518 692 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst4g00122 694 PANTHER CYTOCHROME P450 82C3-RELATED 19 520 - -
Spst4g00122 694 Gene3D Cytochrome P450 526 693 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst4g00122 694 PRINTS P450 superfamily signature 325 342 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst4g00122 694 PRINTS P450 superfamily signature 378 389 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst4g00122 694 PRINTS P450 superfamily signature 457 466 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst4g00122 694 SUPERFAMILY Cytochrome P450 45 520 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst4g00122 694 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 459 468 IPR017972 GO:0005506|GO:0016705
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst4g00122 Spst-Chr4 1220353 1223446 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst4g00122 529 694 Cytochrome P450 AT4G31940 43.114 5.12e-41 155
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst4g00122 - - gmx:100789386 879.782