LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Spst4g00116	ATGTCTTCGTTTTCTCTTACGTTGCTCACATTAATGTCGTTCTTCTGTTTCTGCGTTAACGCGCGTCTAACGTTGGACTTCTACAAGGACTCGTGTCCGCAGTTCGCGCAGATCATCCGCGACACCGTGACCGCGAAACAGATCGCGAGCCCCACGACGGCGGCCGCCACGCTCCGCCTCTTCCTCCACGACTGCCTCCTTCCCAACGGATGCGACGCCTCCATCCTCCTCTCCTCCACGGCGTTCAACAAGGCGGAGCGCGACGCCGACATCAACCTCTCCCTCCCCGGCGACGCCTTCGACCTCGTCGTCCGCGCCAAGACCGCCCTCGAACTCGCCTGCCCCAACACCGTCTCCTGCGCCGACATTCTCTCCGCCGCCACCCGCGACCTTCTCACCATGCTCGGCGGCCCCTTCTACCCCGTCTTCCTCGGCCGCCGCGACGGCCGCTTCTCCTCCGCCGCCGCCGTCCCCAACCACCTCCCCACCCCCTCCATGCCCATGTCCCAAATCACCCAAATCTTCACCAGCCGCGGCTTCTCCGTCGAGGAGTTCGTCGCTCTCACTGGGGCCCACACCGTCGGATTCTCCCATTGCTCTGAATTCGTAACCAATCTCTCCAACTCTTCTTCTTCCTACAACCCTCGTTTTTCTGAAGCTTTATCAAAAGCTTGCGCCGATTACAGAACCAACCCTACCCTTTCCGTCTTCAATGACATCATGACTCCGAACAAGTTCGACAATGTGTACTTCCAGAACCTTCCGAAGGGTTTGGGCGTGCTGAAATCTGATCACGGGTTGTATAGCGACCCTTCTACAAGACCCTTCGTGGAGAGCTTCGCAAAGGATCAAAATAGGTTTTTTAGGGTTTTTGCCTCGGCGATGCAGAAGCTGAGTCTGCTAAATGTGCAGACGGGGAGGAAGGGGGAGATCAGACGCAGGTGTGATCAGATTAATTGA	960	0.5771	MSSFSLTLLTLMSFFCFCVNARLTLDFYKDSCPQFAQIIRDTVTAKQIASPTTAAATLRLFLHDCLLPNGCDASILLSSTAFNKAERDADINLSLPGDAFDLVVRAKTALELACPNTVSCADILSAATRDLLTMLGGPFYPVFLGRRDGRFSSAAAVPNHLPTPSMPMSQITQIFTSRGFSVEEFVALTGAHTVGFSHCSEFVTNLSNSSSSYNPRFSEALSKACADYRTNPTLSVFNDIMTPNKFDNVYFQNLPKGLGVLKSDHGLYSDPSTRPFVESFAKDQNRFFRVFASAMQKLSLLNVQTGRKGEIRRRCDQIN	319

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Annotation information

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Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Spst4g00116	319	ProSiteProfiles	Plant heme peroxidase family profile.	22	319	IPR002016	GO:0004601\|GO:0006979\|GO:0020037
	Spst4g00116	319	Pfam	Peroxidase	42	283	IPR002016	GO:0004601\|GO:0006979\|GO:0020037
	Spst4g00116	319	Gene3D	Peroxidase, domain 2	162	298	-	-
	Spst4g00116	319	PANTHER	-	6	319	IPR000823	GO:0004601\|GO:0006979\|GO:0020037
	Spst4g00116	319	FunFam	Peroxidase	26	173	-	-
	Spst4g00116	319	PRINTS	Plant peroxidase signature	136	151	IPR000823	GO:0004601\|GO:0006979\|GO:0020037
	Spst4g00116	319	PRINTS	Plant peroxidase signature	183	195	IPR000823	GO:0004601\|GO:0006979\|GO:0020037
	Spst4g00116	319	PRINTS	Plant peroxidase signature	237	252	IPR000823	GO:0004601\|GO:0006979\|GO:0020037
	Spst4g00116	319	PRINTS	Plant peroxidase signature	293	306	IPR000823	GO:0004601\|GO:0006979\|GO:0020037
	Spst4g00116	319	PRINTS	Plant peroxidase signature	117	127	IPR000823	GO:0004601\|GO:0006979\|GO:0020037

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Spst4g00116	Spst-Chr4	1152899	1153858	Dispersed/Wgd

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Spst4g00116	21	319	Peroxidase	AT3G28200	67.559	3.64e-156	437

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Spst4g00116	K00430		-	gmx:100817030	549.666

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