Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst4g00116 ATGTCTTCGTTTTCTCTTACGTTGCTCACATTAATGTCGTTCTTCTGTTTCTGCGTTAACGCGCGTCTAACGTTGGACTTCTACAAGGACTCGTGTCCGCAGTTCGCGCAGATCATCCGCGACACCGTGACCGCGAAACAGATCGCGAGCCCCACGACGGCGGCCGCCACGCTCCGCCTCTTCCTCCACGACTGCCTCCTTCCCAACGGATGCGACGCCTCCATCCTCCTCTCCTCCACGGCGTTCAACAAGGCGGAGCGCGACGCCGACATCAACCTCTCCCTCCCCGGCGACGCCTTCGACCTCGTCGTCCGCGCCAAGACCGCCCTCGAACTCGCCTGCCCCAACACCGTCTCCTGCGCCGACATTCTCTCCGCCGCCACCCGCGACCTTCTCACCATGCTCGGCGGCCCCTTCTACCCCGTCTTCCTCGGCCGCCGCGACGGCCGCTTCTCCTCCGCCGCCGCCGTCCCCAACCACCTCCCCACCCCCTCCATGCCCATGTCCCAAATCACCCAAATCTTCACCAGCCGCGGCTTCTCCGTCGAGGAGTTCGTCGCTCTCACTGGGGCCCACACCGTCGGATTCTCCCATTGCTCTGAATTCGTAACCAATCTCTCCAACTCTTCTTCTTCCTACAACCCTCGTTTTTCTGAAGCTTTATCAAAAGCTTGCGCCGATTACAGAACCAACCCTACCCTTTCCGTCTTCAATGACATCATGACTCCGAACAAGTTCGACAATGTGTACTTCCAGAACCTTCCGAAGGGTTTGGGCGTGCTGAAATCTGATCACGGGTTGTATAGCGACCCTTCTACAAGACCCTTCGTGGAGAGCTTCGCAAAGGATCAAAATAGGTTTTTTAGGGTTTTTGCCTCGGCGATGCAGAAGCTGAGTCTGCTAAATGTGCAGACGGGGAGGAAGGGGGAGATCAGACGCAGGTGTGATCAGATTAATTGA 960 0.5771 MSSFSLTLLTLMSFFCFCVNARLTLDFYKDSCPQFAQIIRDTVTAKQIASPTTAAATLRLFLHDCLLPNGCDASILLSSTAFNKAERDADINLSLPGDAFDLVVRAKTALELACPNTVSCADILSAATRDLLTMLGGPFYPVFLGRRDGRFSSAAAVPNHLPTPSMPMSQITQIFTSRGFSVEEFVALTGAHTVGFSHCSEFVTNLSNSSSSYNPRFSEALSKACADYRTNPTLSVFNDIMTPNKFDNVYFQNLPKGLGVLKSDHGLYSDPSTRPFVESFAKDQNRFFRVFASAMQKLSLLNVQTGRKGEIRRRCDQIN 319
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst4g00116 319 ProSiteProfiles Plant heme peroxidase family profile. 22 319 IPR002016 GO:0004601|GO:0006979|GO:0020037
Spst4g00116 319 Pfam Peroxidase 42 283 IPR002016 GO:0004601|GO:0006979|GO:0020037
Spst4g00116 319 Gene3D Peroxidase, domain 2 162 298 - -
Spst4g00116 319 PANTHER - 6 319 IPR000823 GO:0004601|GO:0006979|GO:0020037
Spst4g00116 319 FunFam Peroxidase 26 173 - -
Spst4g00116 319 PRINTS Plant peroxidase signature 136 151 IPR000823 GO:0004601|GO:0006979|GO:0020037
Spst4g00116 319 PRINTS Plant peroxidase signature 183 195 IPR000823 GO:0004601|GO:0006979|GO:0020037
Spst4g00116 319 PRINTS Plant peroxidase signature 237 252 IPR000823 GO:0004601|GO:0006979|GO:0020037
Spst4g00116 319 PRINTS Plant peroxidase signature 293 306 IPR000823 GO:0004601|GO:0006979|GO:0020037
Spst4g00116 319 PRINTS Plant peroxidase signature 117 127 IPR000823 GO:0004601|GO:0006979|GO:0020037
Spst4g00116 319 PRINTS Plant peroxidase signature 56 76 IPR000823 GO:0004601|GO:0006979|GO:0020037
Spst4g00116 319 PRINTS Plant peroxidase signature 32 51 IPR000823 GO:0004601|GO:0006979|GO:0020037
Spst4g00116 319 PRINTS Plant peroxidase signature 253 270 IPR000823 GO:0004601|GO:0006979|GO:0020037
Spst4g00116 319 PRINTS Plant peroxidase signature 98 111 IPR000823 GO:0004601|GO:0006979|GO:0020037
Spst4g00116 319 FunFam Peroxidase 162 298 - -
Spst4g00116 319 PRINTS Haem peroxidase superfamily signature 54 68 IPR002016 GO:0004601|GO:0006979|GO:0020037
Spst4g00116 319 PRINTS Haem peroxidase superfamily signature 136 148 IPR002016 GO:0004601|GO:0006979|GO:0020037
Spst4g00116 319 PRINTS Haem peroxidase superfamily signature 118 135 IPR002016 GO:0004601|GO:0006979|GO:0020037
Spst4g00116 319 PRINTS Haem peroxidase superfamily signature 239 254 IPR002016 GO:0004601|GO:0006979|GO:0020037
Spst4g00116 319 PRINTS Haem peroxidase superfamily signature 184 199 IPR002016 GO:0004601|GO:0006979|GO:0020037
Spst4g00116 319 SUPERFAMILY Heme-dependent peroxidases 23 319 IPR010255 GO:0004601|GO:0006979|GO:0020037
Spst4g00116 319 Gene3D - 26 315 - -
Spst4g00116 319 CDD secretory_peroxidase 23 318 IPR033905 GO:0004601|GO:0042744
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst4g00116 Spst-Chr4 1152899 1153858 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst4g00116 21 319 Peroxidase AT3G28200 67.559 3.64e-156 437
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst4g00116 K00430 - gmx:100817030 549.666