Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst4g00096 ATGGATAGAAGGTACTGTTACAAGGATTTGCTACCTCTGGTGGTTCTTGTTGCCAATGAATGCAACAACACAGCCTTGTTCACTCTCTTCAAAGCAGCCACTCTGCAAGGGATGAGTAGCTATGTCTTTGTCTCCTATGCCTATTCTTTGGCCTTTCTTGTACTCCTTCCTATTACTTTTCTCTACAGAAGATCGAGAGTGGTTCCTCCACTCAGTTTTTCCATCCTATCCAAAATTGCTCTTCTTGGAGTCATAGGATGTTCATCTCAGATTCTGGGGTATGTTGGCATCAGTTATAGTTCTCCCACACTTTCCTCTGCAATCAGCAACCTCACTCCTGCTTTCACCTTCATACTTGCTGTCATTTGCAGGATGGAAAAGATAGCTATAAGAAGTAGAACTACCCAAGCTAAGATTTGGGGCAGCATTATATCAATATCAGGTGCATTTATTGTGACTTTCTACAAAGGTCAATCGATCATCATCGCTGATGATTCCCCTTCAATTCAACTTTCACAATCAAATGCCATTCTTACTTCAGTAGATAAAAGTTGGGCCTTTGGTGGCCTTCTGCTGACAGCTTGCAATATACTACTTACTGTATGGTTCGTTTTACAGGTTGAAATCTTGAAGGAGTTCCCGGATGAACTAACTATGGTGTTCTTTTACAACTTGTGTGCAGCCATTGTAGCTTCAATTGTAGGTTTAATGGCGGAGAAAAATTCAAGTGCGTGGCAAATAAGACCAGATATATGCCTGCTCTCTATTGTTTGCACTGGAATATTTAACAAGTTCCTGAGTAGTGCAATATATGCCTGGGGAATACACTTAAAGGGGCCTGTATATGTGGCAATGTTCAAGCCTCTCTCAATTGTTATTGCAGTTGCCATGGGTGTTATGTTCCTTGGTGACACTCTATATAGTGGAAGTATAATTGGAGCCACAATAATATCAATTGGGTTTTATACTGTGATGTGGGGCAAAGCAACTGAACAGAAGGAAGAGGAGGGGGAGGAACATCTTGGTAGCCAGGAAACACCAATCACTGAGAATGTTCCTCTCTTGCAAAGCTGTAAAACTGTAAATTGTAAATAG 1095 0.4119 MDRRYCYKDLLPLVVLVANECNNTALFTLFKAATLQGMSSYVFVSYAYSLAFLVLLPITFLYRRSRVVPPLSFSILSKIALLGVIGCSSQILGYVGISYSSPTLSSAISNLTPAFTFILAVICRMEKIAIRSRTTQAKIWGSIISISGAFIVTFYKGQSIIIADDSPSIQLSQSNAILTSVDKSWAFGGLLLTACNILLTVWFVLQVEILKEFPDELTMVFFYNLCAAIVASIVGLMAEKNSSAWQIRPDICLLSIVCTGIFNKFLSSAIYAWGIHLKGPVYVAMFKPLSIVIAVAMGVMFLGDTLYSGSIIGATIISIGFYTVMWGKATEQKEEEGEEHLGSQETPITENVPLLQSCKTVNCK 364
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst4g00096 364 SUPERFAMILY Multidrug resistance efflux transporter EmrE 228 329 - -
Spst4g00096 364 Pfam EamA-like transporter family 26 153 IPR000620 GO:0016020
Spst4g00096 364 Pfam EamA-like transporter family 188 325 IPR000620 GO:0016020
Spst4g00096 364 PANTHER WAT1-RELATED PROTEIN 11 336 IPR030184 GO:0016020|GO:0022857
Spst4g00096 364 SUPERFAMILY Multidrug resistance efflux transporter EmrE 49 155 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst4g00096 Spst-Chr4 1011999 1015349 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst4g00096 1 360 Nodulin-like Gene Family AT3G28050 49.326 8.69e-119 347
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst4g00096 - - gmx:100791805 618.616
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst4g00096 4 1011999 1015349 Spst4g00096 4 1011999 1015349 ECH