Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst4g00095 ATGGCAAGAGAATGGTCCTTTTACAGGAACTTTCTGCCAATAGTGGTGCTTATAGGCACTGAATGCAATGACATGGGTTTACTCACACTGTTCAAAGCAGCCACACTGCAAGGAATGAACAACCATGTCTTTGTGGCCTATGCTTATGCTGTTGCAACCACTATTCTCCTTCCTGTCACTTTTTTCCACAGAAGATCAAGAGTGGTTCCTCCACTCAGTTGGTCCATAATATCCAAAATAGTTCTTCTTGGGGTGATAGGAAGTTCATCTCAGATCCTGGGTTATGCAGGAATCAGCTATAGTTCTCCAACACTAGCTTCATCAATTAGCAATCTGGTACCTGCTTTCACCTTCATCCTTGCCGTGATTTGCAGGATGGAAAAGTTAGCTGCTAAATGTAGAAGTAGTCAAGCCAAGATAGTGGGAAGCATAATATCAATAGCAGGTGCATTTGTATTGACTTTCTACAAAGGACCATCAATCATCAATGCTCACACACATCTTTCCTTATTACCTCAACAACCAATTAAGTTTCTTAAATCAGAGGATGCAAGCTGGGCCAGTGGTGGCATTCTTCTGATAGCTGATTACATTCTGACTTCGGTATGGTACATTTTAGAGGAGGATATTTTGAGAGTGTTCCCGGATGAACTTACTCTAGTCTTCTTTTACAGTGTGACTGCCACCATATTCAGTACAACTGTAGGTTTATTTGAAGTGCCAAATGCTAGTGCTTGGAAAATAGGACTGAATATTTCACTGATCTCCATTGTTAGCTCAGGAATATTTGGAAAGTTAATGAGCAATGTAGTTTATGCCTGGGCACTGAATTTAAAGGGGTCTGTCTTTGTAACATCCTTCAAGCCATTCCAAATTATTATGTCAGTTGCATTGGGTGTTATGTTCCTTGATGATACTCTGTACATTGGAAGTGTAGTTGGAGCCATAATAGTATCAGTTGGCCTTTATGTTGTATTGTGGGGCAAGGCAACAGAAGAAATAGAGGAAGATGTTGGTAACCTGGAATCACCAACTACTGAGAATGTCCCTCTCTTACCAAGCCACAGAACTGAAACATCAGAAAATAAAGTTTGCAAGACAAATACAAACTCTTCCCACTTTTAA 1125 0.4036 MAREWSFYRNFLPIVVLIGTECNDMGLLTLFKAATLQGMNNHVFVAYAYAVATTILLPVTFFHRRSRVVPPLSWSIISKIVLLGVIGSSSQILGYAGISYSSPTLASSISNLVPAFTFILAVICRMEKLAAKCRSSQAKIVGSIISIAGAFVLTFYKGPSIINAHTHLSLLPQQPIKFLKSEDASWASGGILLIADYILTSVWYILEEDILRVFPDELTLVFFYSVTATIFSTTVGLFEVPNASAWKIGLNISLISIVSSGIFGKLMSNVVYAWALNLKGSVFVTSFKPFQIIMSVALGVMFLDDTLYIGSVVGAIIVSVGLYVVLWGKATEEIEEDVGNLESPTTENVPLLPSHRTETSENKVCKTNTNSSHF 374
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst4g00095 374 Pfam EamA-like transporter family 26 154 IPR000620 GO:0016020
Spst4g00095 374 PANTHER WAT1-RELATED PROTEIN 13 342 IPR030184 GO:0016020|GO:0022857
Spst4g00095 374 MobiDBLite consensus disorder prediction 341 374 - -
Spst4g00095 374 SUPERFAMILY Multidrug resistance efflux transporter EmrE 49 157 - -
Spst4g00095 374 SUPERFAMILY Multidrug resistance efflux transporter EmrE 234 329 - -
Spst4g00095 374 MobiDBLite consensus disorder prediction 337 374 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst4g00095 Spst-Chr4 1005878 1008779 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst4g00095 1 358 Nodulin-like Gene Family AT3G28050 46.237 2.69e-109 323
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst4g00095 - - gmx:100790743 568.926