Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst4g00089 ATGTTGATAGCAAAAGATGAGATATTCGGCCCAGTTCAATCTATCTTGAAATTCAAGGATCTAGAGGAGGTCATAAGAAGGGCCAATGCAACTTCCTATGGCTTGGCTGCTGGAGTTTATACTCGGAATATAGACACTGCCAATACCTTGATGCGGGCATTGCGAGTTGGAACAGTATGGATCAACTGCTATGATATCTTTGATGCAGCAATACCTTTTGGTGGGTATAAAATGAGTGGTCAAGGGAGGGTAAGGGGAATCTACAGCCTTAGAAGCTACCTTCAAGTTAAAGCTTCTGTCACTGCTTTGAAGAATCCTGCATGGCTCTAG 330 0.4333 MLIAKDEIFGPVQSILKFKDLEEVIRRANATSYGLAAGVYTRNIDTANTLMRALRVGTVWINCYDIFDAAIPFGGYKMSGQGRVRGIYSLRSYLQVKASVTALKNPAWL 109
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst4g00089 109 Pfam Aldehyde dehydrogenase family 1 98 IPR015590 GO:0016491
Spst4g00089 109 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 71 98 IPR016162 GO:0016491
Spst4g00089 109 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 1 70 IPR016163 GO:0016620
Spst4g00089 109 PANTHER ALDEHYDE DEHYDROGENASE-RELATED 1 98 - -
Spst4g00089 109 SUPERFAMILY ALDH-like 1 102 IPR016161 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst4g00089 Spst-Chr4 936953 937368 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst4g00089 1 109 Aldehyde Dehydrogenase Gene Family AT3G48000 74.312 3.03e-57 183