Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst4g00079 ATGAGGAAGAGTGAGAGTGGGGGGTATGTTAGAGCGGATCAGATAGATCTGAAGAGCTTGGATGAGCAGCTTCAGAGGCATCTGAGTAGAGCATGGACTATGGAGAAGAACAAGGAAAAGGAGGAAGAGGAGGTTGAAGGAAGGTCCACAAGAAGCAGACAAGAATGGGAGATTGACCCCTCTAAGCTTGTCATCAAGACTGTCATTGCTCGTGGCACTTTCGGCACTGTACATCGGGGGATTTACGATGGCCAAGATGTTGCAGTTAAGCTCCTTGACTGGGGGGAAGAGGGACATCGGTCAGATGCTGAAATAGCATCTTTGAGAGCGGCTTTTACTCAAGAAGTTGCTGTTTGGCACAAGCTTGACCATCCTAATGTAACCAAGTTTATTGGGGCAACAATGGGAACATCAGAGCTACAGATACAAACGGAAAATGGTCATATAGGCATGCCAAGTAATGTTTGTTGTGTTGTTGTTGAATATTGTCCTGGTGGTGCACTGAAGACTTATCTCATTAAAAACAGAAGAAGGAAGCTGGCTTTTAAAGTGGTTGTTCAACTGGCTCTTGACCTTGCTAGAGGGTTGAGCTATCTGCACACAAAGAAGATTGTCCACAGAGATGTTAAAACAGAAAATATGCTTCTGGACAAGACACGAACCTTAAAAATAGCTGATTTTGGAGTGGCTCGTATTGAGGCTTCCAATCCTCATGACATGACAGGTGAAACTGGAACCCTTGGTTACATGGCTCCTGAGGTTCTAAATGGTAATCCATACAATAGAAAGTGTGATGTGTACAGTTTTGGCATATGCTTATGGGAGATATACTGCTGTGACATGCCATATCCCGACCTTAGCTTCTCCGAAGTGACGTCTGCTGTCGTACGACAGAATCTGAGGCCAGAGATTCCACGATGTTGTCCTAGCTCTCTGGCAAATGTGATGAAAAGATGCTGGGATGCGAATCCTGATAAGAGGCCAGAGATGGATGAAGTAGTGTCCATGTTGGAAGCCATTGACACTTCAAAGGGTGGAGGAATAGGGAAGGAAGACTCAGGATGGAATGCATACACAAAAGGTGTGAAAGCCATAGATAATGAAGAGCTCTGCAATTACTTGTTACTTTGTTGGGCTATAATTTTTGTAAAGCTAATTGTGCTCTCTCCTCATTGCACCCATTTTTATAATATTTTCCATGTAAGTTGTACACTTGACAGTAGTAGCATGGATTGTTCCAACACTAATATCAAAGTTCTAATGGGTCATTTCATGTCCTATGAGCCTACGAGTGATCTGATTTGGGAACTTCTGCTCATGTGCAGAAAGACATGA 1335 0.436 MRKSESGGYVRADQIDLKSLDEQLQRHLSRAWTMEKNKEKEEEEVEGRSTRSRQEWEIDPSKLVIKTVIARGTFGTVHRGIYDGQDVAVKLLDWGEEGHRSDAEIASLRAAFTQEVAVWHKLDHPNVTKFIGATMGTSELQIQTENGHIGMPSNVCCVVVEYCPGGALKTYLIKNRRRKLAFKVVVQLALDLARGLSYLHTKKIVHRDVKTENMLLDKTRTLKIADFGVARIEASNPHDMTGETGTLGYMAPEVLNGNPYNRKCDVYSFGICLWEIYCCDMPYPDLSFSEVTSAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEVVSMLEAIDTSKGGGIGKEDSGWNAYTKGVKAIDNEELCNYLLLCWAIIFVKLIVLSPHCTHFYNIFHVSCTLDSSSMDCSNTNIKVLMGHFMSYEPTSDLIWELLLMCRKT 444
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst4g00079 444 ProSiteProfiles Protein kinase domain profile. 63 340 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst4g00079 444 PRINTS Tyrosine kinase catalytic domain signature 198 216 IPR001245 GO:0004672|GO:0006468
Spst4g00079 444 PRINTS Tyrosine kinase catalytic domain signature 264 286 IPR001245 GO:0004672|GO:0006468
Spst4g00079 444 PRINTS Tyrosine kinase catalytic domain signature 308 330 IPR001245 GO:0004672|GO:0006468
Spst4g00079 444 PRINTS Tyrosine kinase catalytic domain signature 160 173 IPR001245 GO:0004672|GO:0006468
Spst4g00079 444 Gene3D Phosphorylase Kinase; domain 1 51 146 - -
Spst4g00079 444 FunFam Kinase suppressor of Ras 1 52 147 - -
Spst4g00079 444 ProSitePatterns Serine/Threonine protein kinases active-site signature. 204 216 IPR008271 GO:0004672|GO:0006468
Spst4g00079 444 Pfam Protein tyrosine and serine/threonine kinase 64 337 IPR001245 GO:0004672|GO:0006468
Spst4g00079 444 Gene3D Transferase(Phosphotransferase) domain 1 163 359 - -
Spst4g00079 444 CDD STKc_MAP3K-like 69 337 - -
Spst4g00079 444 MobiDBLite consensus disorder prediction 31 53 - -
Spst4g00079 444 Coils Coil 24 44 - -
Spst4g00079 444 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 54 341 - -
Spst4g00079 444 SUPERFAMILY Protein kinase-like (PK-like) 45 337 IPR011009 -
Spst4g00079 444 FunFam Serine/threonine-protein kinase HT1 163 348 - -
Spst4g00079 444 SMART serkin_6 63 340 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst4g00079 Spst-Chr4 843014 847258 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst4g00079 3 304 MAP Kinase Kinase Kinase AT3G01490 76.301 0.0 537
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-4 Spst4g00079 PK_Tyr_Ser-Thr 1.3e-63 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst4g00079 - - aprc:113866520 765.763