Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst4g00075 ATGGTTGATGCAAGAACCTTTGTGGTTGGGATTGCAGATGGTTCGTGCTCAGAGGACATATGTTGGACATTTAACGCCAGTGTTTGGTCTAAGGACAAGGTCTTCCTGGCTGGTGATGTTCTTGTATTCAATTACAAGCCTTCTGTGCACAACGTGGTGGCCGTGGACGAGGAAGGATACAAAACATGTAAGGCTTCGAAAAATGCAGTGGTTTACGAGACAGGACATGATCGGATTCAACTCCCCGAAGGAGGAGATAGTTTCTTCATTTCTACTGTTGCTAGTGACTGTCAAAGAGGCATGAGAATCGAAGCCTCTTATGTATAA 327 0.4495 MVDARTFVVGIADGSCSEDICWTFNASVWSKDKVFLAGDVLVFNYKPSVHNVVAVDEEGYKTCKASKNAVVYETGHDRIQLPEGGDSFFISTVASDCQRGMRIEASYV 108
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst4g00075 108 SUPERFAMILY Cupredoxins 6 104 IPR008972 -
Spst4g00075 108 CDD Plantacyanin 5 103 IPR041844 -
Spst4g00075 108 ProSiteProfiles Phytocyanin domain profile. 5 108 IPR003245 GO:0009055
Spst4g00075 108 Pfam Plastocyanin-like domain 22 101 IPR003245 GO:0009055
Spst4g00075 108 Gene3D - 17 106 IPR008972 -
Spst4g00075 108 PANTHER BLUE COPPER PROTEIN 21 104 IPR039391 GO:0009055
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst4g00075 Spst-Chr4 810824 811268 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst4g00075 6 103 Phytocyanin Superfamily AT1G17800 34.000 2.38e-15 65.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst4g00075 - - var:108345371 145.206