Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst4g00074 ATGAGTGAAAGAAGAGGAAATGGTGCAGCAATGATGCTGTTGTGTATGTTGGTGGTTTACTCAGAGATGGTTCATGGAACCACCTTTCTGGTTGGAGATGAAGGTGGCTGGACCTTCAATGTCACTAACTGGCCTAATGGAAAGCAGTTTAAGGCTGGTGATATACTTGAATTTCGTTATGATTGTATGTCTCATGATGTGTTGAAAGTGGAGGAGTTTGGATACAACACATGCATTCCTACGATTGGATCAAAACCTTACACTTCAGGAAAAGATCTGATTCAGCTTGAAAAAGGAACTAATTACTTCATCTGTGGTTTTCCTTTTCACTGTCAGGGTGGCATGAAGATTGCAATCAATGCTGTCTGA 369 0.4092 MSERRGNGAAMMLLCMLVVYSEMVHGTTFLVGDEGGWTFNVTNWPNGKQFKAGDILEFRYDCMSHDVLKVEEFGYNTCIPTIGSKPYTSGKDLIQLEKGTNYFICGFPFHCQGGMKIAINAV 122
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst4g00074 122 CDD Plantacyanin 27 121 IPR041844 -
Spst4g00074 122 Gene3D - 27 122 IPR008972 -
Spst4g00074 122 ProSiteProfiles Phytocyanin domain profile. 27 122 IPR003245 GO:0009055
Spst4g00074 122 SUPERFAMILY Cupredoxins 28 121 IPR008972 -
Spst4g00074 122 PANTHER BLUE COPPER PROTEIN 20 120 IPR039391 GO:0009055
Spst4g00074 122 FunFam basic blue protein-like 27 121 - -
Spst4g00074 122 ProSitePatterns Type-1 copper (blue) proteins signature. 99 115 IPR028871 -
Spst4g00074 122 Pfam Plastocyanin-like domain 37 115 IPR003245 GO:0009055
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst4g00074 Spst-Chr4 806814 807275 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst4g00074 11 122 Phytocyanin Superfamily AT1G17800 41.176 3.11e-23 86.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst4g00074 - - gmx:100818617 175.252