Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst4g00069 ATGGAAAGTTCTCCTAGCATTCCATCACACATAAAAGCTTGGGTTTACTTTGAATATGGAAACACAGAAGAGATTCTAATCTTAGAATCTAACATACCTATACCAGACACCAAGGAAGATCAAGTCCTCATCAAGGTTGTGGCTGCAGCTCTTAATCCTATAGATTATAAGAGGGCTCTTGGCTCCTTCAAGAGCATTGATTCTCCCTTACCTACAGTTCCGGGGTATGATGTTGCTGGTGTGGTGGTGAGAGTGGGAAGTCAAGTGAAAAAATTCAAGGTTGGTGATGAGGTTTATGGTGACATCAATCAGGATCCTCTGAACAATCCAAAAACTATTGGATCTTTGGCAGAGTATACTGCTGTTGAAGAAAAAGTATTGGCTCACAAACCCTCCAATTTGAACTTTATTGAAGCTGCTGCCCTTCCTTTAGCCATCATCACTGCTTATCAAGGACTTGAAAGGGTTGAGTTTTCTGCTGGCAAATCTATACTTGTTCTTGGAGGTGCTGGTGGAGTTGGATCCCTTGTTATTCAGGTAGCCAAGCACGTTTTTAAGGCATCAAAGGTTGCAGCCACAGCCAGTACTGCAAAACTAGATTTGTTAAGGGACTTGGGAGCAGACTTAGCTATTGATTACACAAAGGAGAATGTTGCAGAGTTGGAAGAAAAGTTTGATGTAGTGTATGATACTGTAGGACATAGTGAGATTGAGGGAGCATTGAAGGCTGTTAAAGAAAGTGGCAAAGTTGTGACAATAGCAGCATATGGAAATCCTGAAGCTATCTTCTTAAGACGCATTTCAGATGGTAGTGTGTTGGAGAAACTGCATCCTTACTTAGAGAGTGGGAAGGTGAAGCCATTACTGGATCCTAAGAGTCCCTTTTTGTTTTCTCAGACTGTGGAGGCATTTGCACACTTGAAGACTAATAGAGCCATTGGAAAAAGACAGAAGATTTCAAAGGATAGAGAACTTGAAGTATTTGCAGAAAATTTGAAAGCGTATGAGCAAAGGTTACCCTACAAGCCATAA 1032 0.4118 MESSPSIPSHIKAWVYFEYGNTEEILILESNIPIPDTKEDQVLIKVVAAALNPIDYKRALGSFKSIDSPLPTVPGYDVAGVVVRVGSQVKKFKVGDEVYGDINQDPLNNPKTIGSLAEYTAVEEKVLAHKPSNLNFIEAAALPLAIITAYQGLERVEFSAGKSILVLGGAGGVGSLVIQVAKHVFKASKVAATASTAKLDLLRDLGADLAIDYTKENVAELEEKFDVVYDTVGHSEIEGALKAVKESGKVVTIAAYGNPEAIFLRRISDGSVLEKLHPYLESGKVKPLLDPKSPFLFSQTVEAFAHLKTNRAIGKRQKISKDRELEVFAENLKAYEQRLPYKP 343
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst4g00069 343 ProSitePatterns Quinone oxidoreductase / zeta-crystallin signature. 161 182 IPR002364 GO:0008270|GO:0016491
Spst4g00069 343 PANTHER NADPH-DEPENDENT ALKENAL/ONE OXIDOREDUCTASE, CHLOROPLASTIC 4 315 IPR044626 GO:0016628
Spst4g00069 343 Gene3D - 153 269 - -
Spst4g00069 343 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 134 262 IPR036291 -
Spst4g00069 343 SUPERFAMILY GroES-like 8 166 IPR011032 -
Spst4g00069 343 Pfam Zinc-binding dehydrogenase 172 264 IPR013149 -
Spst4g00069 343 CDD MDR_like_2 12 315 - -
Spst4g00069 343 Pfam Alcohol dehydrogenase GroES-like domain 40 102 IPR013154 -
Spst4g00069 343 SMART PKS_ER_names_mod 20 315 IPR020843 GO:0016491
Spst4g00069 343 Gene3D - 18 315 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst4g00069 Spst-Chr4 773272 776990 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst4g00069 36 259 Monolignol Biosynthesis Gene Families AT4G34230 27.778 1.78e-07 50.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst4g00069 K18980 - gmx:100793908 488.419