Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst4g00059 ATGGCAGCAGAATTTGTTGGTGGTGCTCTTCTTTCTGCTTTCCTTCAGGTTGCATTTGACAGACTGGCCTCTCCTAAAGTTTTAGACTTCTTTCGTCGAAGAAAACTTGATGAGAAGCTGCTCAACAACTTGAACATCATGCTGCACTCCATCGATGTTCTTGTTGATGATGCAGAACAAAAGCAGCTCAGAGATCCACGCGTTCGAGCATGGATTTTTGCTGTCAAAGATGCTGTCTTTGATGCAGAGGATCTCTTGGATGAAATCGACTATGAAGTCACCAAATGCGAAGTGGAAGCTGAACTTGAACCCCAAACCTTCACTTACAAGGTATCAAATTTCTTCAGTACTACTTTCAGTTCATTTAACAAGAAAATTGACTCAGGGATGAAAGAAGTCCTGGAAAAACTAGAATATCTTGCAAGGCAAAAGAGTGCTCTTGGTTTGAAAGAGTGTACTTATTCTAGTGTTAGATCAGGTAGTAATGTGTCACAGAAATTGCCATCAACTTCATTGGTGGTTGAAAGTGTTATTTATGGCAGAGATGCTGACAAAGAAATGATCTTTAATTGGCTCACATCTGCAGCCGACAATCGTAACCAGCCATCAATACTTTCTATTGTGGGCATCGGTGGGTTGGGTAAGACCACACTCGCCCAACATGTATACAATGACCCAAGGATGGATGAGGCTAAATTTGATATCAAAGCGTGGGTCTGTGTTTCAGATGATTTTGATGTTTTGAGAGTGACAAAAGCAATTCTTGAGGCAATCACTAAGTCTAAAGATGATAGCGGAGACTTAGAAATGGTTCATGGAAGATTGAAAGAAAAATTGGCAGGGAAGCGATTTCTTCTTGTTTTGGATGATGTTTGGTCAGAAAGACGAGAAGAATGGGAAGCCGTGCGAACTCCTCTTAGCTATGGGGCTCAAGGTAGTAGAATTCTTGTCACGACACGCAGTAAGAAAGTTACTTCTAACATGCGCTCTGAAGTGCATTGGCTGGGGAAATTACAAGAGGATGATTGCTGGGATGTTTTTGAAAAGCACGCATTAAAAGATGATAAGCTCAAGTTGAATGATGAGTTAAAGGAGATTGGTGCAAAGATAGTTGAAAAGTGCAAAGGATTACCGCTTGCATTGAAAACAATTGGAAGTCTTTTACGCACAAAGTCATCCATTTCAGAATGGAAAAGCGTATTGGAAAGCAACATATGGGACTTACCAAAAGAAGACAGTGAAATTATTCCTTCTCTATATCTGAGCTATCACTACCTTCCTTCTCATCTCAAGAGGTGCTTTGCTTATTGTGCATTATTCCCGAAAGATTATGTGTTTGGCAAGGAGGAATTAATTTTATTGTGGATGGCAGAAAATTTTCTTCAATTCCCTCAACAGAGCAAGAGTCTAGAAGAAGTTGGTGAACAGTATTTTGATGATCTATTATCAAGGTCTTTCTTTCAAAGTTCAACAGAATACGGACGACATTTTGTGATGCATGACCTTGTGAACGATTTGGCAAAATATGTTTCTGGGGACATCTGTTACAAGTTAAAATTTGATAAAGGAAGATGTATACCAAAATCAACCCGTCATTTTTCATTTAAAGGCGATGACGTTAAATATTTTGATGGTTTCGGGAGTTTAACTGAGGCTAAAAGATTGCGTACATTTTTGCCGGTTAAAATAATTGGGGGAATTTATTTTGATCCTTATTCTTGGCAATTCAACATTTCGATACATGAATTGTTCTCCCAGTTTAAATTCTTTCGTGTCTTATCTTTGTCTCGTTGTTCTCAGCTTAAAGAGGTGCCCGACTCTGTAGGTGATCTTAAATATCTCCATTCGTTAAACCTTTCGAGGACTGGGATACGAAAACTACCTGATTCAATTTGTTTCCTCTATAATTTGTTAATACTAAACCTGAATTATTGTTTCAATCTAGAGGAGCTGCCCCCAAATTTGCATAAACTCACCAAGTTGCGTTACCTTGAATTTCAACATACAAAGGTGACAAAGATGCCACTGCATTTGGGAGAATTGAAGAATCTTCAAGTACTGAGCAAGTTTTATGTGGATATAGATAGTGAGTGTAGTACTAAACAGTTAGGAGGACTCAATCCTCGTGAGCTATCCATTGAGCAGCTACAGAATGTTGTGAATCCTTCATATGCAATGGCAGTGGATTTGAAAAATAAAACGCACCTTGTCAGACTAAAATTGAAATGGAATTCAGACCACATCCCAGATGATCCAAGGAAAGAAAAGGAAGTACTTGAGAATCTACAACCTTCCAAACACTTGGAGAGTTTGTCAATAAGTAACTATGGTGGTACACAATTCCCACGTTGGCTATTCGATGATTCATTGTCAAATATGGTGTCCTTACGGTTGGTGGACTGTAAATATTGCCTATGTTTGCCTGCCCTTGGACTTTTGTCATCTCTGAAGACCCTAGAAATTAGAGGGCTTGATGGAATAGTGAGCGTTGGTGCTGAATTTTATGGGAATGGCTCTTCTTCATTTCCATCCTTAGAAGCATTATTCTTCAAGGAAATGATGGAATGGGAAGAATGGGAATGTAAAACTGCTGCTTTTTCACGTCTTGAACGTCTTTATTTAGAGACATGTCCCAAGCTAAAAGTTGTGCCGGAGCAACTTCTTCATTTGAAGCAACTACTTATTTATTACAGCATCGAAGCATCGTTCCTCAAAAGGAGTGGGCACAATGTATCTGATAATTCTCTTCAAGCCTTGAGCCTCTGTACTAACCCAATTCCGAATATTCCCATGAGTCATTGCTACAATTTGCTTGAAAATTTTCTGATCATGAACAGTTGTAACTCTCTAACAACCTTTCCGCTAGATCTCTTCCCAAAACTAAAGTTTCTACAGCTGTACGGTTGTCCTAACCTACAAATGATTTCACAGGAGCACACTCATAATCGTCTTGGTGATCTGATAATTGCCGATTGCCCTCAATTTGAATCATTTCCCAGTGAAGGATTATCTGCGCCGTTGTTAACAAAACTTCAACTGGAGGGATTGGAGAATTTGAAATTATTGCCTAAAAGCATGCATATCCTGCTTCCCTCTCTTACTGAGCTGTGGATAAAGGATTGTCCACAAGTGGAGATGTTCCCAGATGGAGGTTTGCCATCAAATCTAAAATATTTGTCTCTCTCAAGTTTCAAACTTACTGCTTCACTGAATGAGACCTTGGATGCCAACACATGCCTAGAAACACTGATTATTCAAAAAATGGATGTGGAGTCCTTTCCCGATGAAGGTTTTCTACCACTCTCTTTTAGCTATCTAGCATTGATTGATTTCCCAGATCTTAAAAAACTGGACTACAAGGGTCTCTGTCACCTCTCCTCTCTCAAGACATTGAGACTTTGTAACTGCCCCAGCCTCCAATGCTTACCGGAGGAGGGTCTGCCCAAATCCATTTCAACTCTTCAAATCTGTGGTTGTCCATTGCTCGAACAGCGTTGCCAGCAACACGAAGGTGAAGATTGGGGAAAGATTGCTCATATTGAACAAGTGGATATTGGCGAATAA 3564 0.3967 MAAEFVGGALLSAFLQVAFDRLASPKVLDFFRRRKLDEKLLNNLNIMLHSIDVLVDDAEQKQLRDPRVRAWIFAVKDAVFDAEDLLDEIDYEVTKCEVEAELEPQTFTYKVSNFFSTTFSSFNKKIDSGMKEVLEKLEYLARQKSALGLKECTYSSVRSGSNVSQKLPSTSLVVESVIYGRDADKEMIFNWLTSAADNRNQPSILSIVGIGGLGKTTLAQHVYNDPRMDEAKFDIKAWVCVSDDFDVLRVTKAILEAITKSKDDSGDLEMVHGRLKEKLAGKRFLLVLDDVWSERREEWEAVRTPLSYGAQGSRILVTTRSKKVTSNMRSEVHWLGKLQEDDCWDVFEKHALKDDKLKLNDELKEIGAKIVEKCKGLPLALKTIGSLLRTKSSISEWKSVLESNIWDLPKEDSEIIPSLYLSYHYLPSHLKRCFAYCALFPKDYVFGKEELILLWMAENFLQFPQQSKSLEEVGEQYFDDLLSRSFFQSSTEYGRHFVMHDLVNDLAKYVSGDICYKLKFDKGRCIPKSTRHFSFKGDDVKYFDGFGSLTEAKRLRTFLPVKIIGGIYFDPYSWQFNISIHELFSQFKFFRVLSLSRCSQLKEVPDSVGDLKYLHSLNLSRTGIRKLPDSICFLYNLLILNLNYCFNLEELPPNLHKLTKLRYLEFQHTKVTKMPLHLGELKNLQVLSKFYVDIDSECSTKQLGGLNPRELSIEQLQNVVNPSYAMAVDLKNKTHLVRLKLKWNSDHIPDDPRKEKEVLENLQPSKHLESLSISNYGGTQFPRWLFDDSLSNMVSLRLVDCKYCLCLPALGLLSSLKTLEIRGLDGIVSVGAEFYGNGSSSFPSLEALFFKEMMEWEEWECKTAAFSRLERLYLETCPKLKVVPEQLLHLKQLLIYYSIEASFLKRSGHNVSDNSLQALSLCTNPIPNIPMSHCYNLLENFLIMNSCNSLTTFPLDLFPKLKFLQLYGCPNLQMISQEHTHNRLGDLIIADCPQFESFPSEGLSAPLLTKLQLEGLENLKLLPKSMHILLPSLTELWIKDCPQVEMFPDGGLPSNLKYLSLSSFKLTASLNETLDANTCLETLIIQKMDVESFPDEGFLPLSFSYLALIDFPDLKKLDYKGLCHLSSLKTLRLCNCPSLQCLPEEGLPKSISTLQICGCPLLEQRCQQHEGEDWGKIAHIEQVDIGE 1187
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst4g00059 1187 PRINTS Disease resistance protein signature 278 292 - -
Spst4g00059 1187 PRINTS Disease resistance protein signature 585 601 - -
Spst4g00059 1187 PRINTS Disease resistance protein signature 374 388 - -
Spst4g00059 1187 PRINTS Disease resistance protein signature 204 219 - -
Spst4g00059 1187 FunFam Probable disease resistance protein At1g61300 161 333 - -
Spst4g00059 1187 SUPERFAMILY L domain-like 915 1178 - -
Spst4g00059 1187 Gene3D - 337 422 IPR042197 -
Spst4g00059 1187 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 161 437 IPR027417 -
Spst4g00059 1187 Gene3D Ribonuclease Inhibitor 914 1048 IPR032675 -
Spst4g00059 1187 Gene3D Ribonuclease Inhibitor 710 907 IPR032675 -
Spst4g00059 1187 Gene3D - 160 335 IPR027417 -
Spst4g00059 1187 Pfam NB-ARC domain 183 402 IPR002182 GO:0043531
Spst4g00059 1187 Gene3D Ribonuclease Inhibitor 573 702 IPR032675 -
Spst4g00059 1187 FunFam Probable disease resistance protein At1g63360 423 509 - -
Spst4g00059 1187 SUPERFAMILY L domain-like 498 893 - -
Spst4g00059 1187 Pfam Rx N-terminal domain 11 100 IPR041118 -
Spst4g00059 1187 Gene3D Ribonuclease Inhibitor 1049 1186 IPR032675 -
Spst4g00059 1187 Gene3D - 423 509 IPR036388 -
Spst4g00059 1187 PANTHER DISEASE RESISTANCE PROTEIN RP 59 986 IPR044974 GO:0006952
Spst4g00059 1187 Gene3D - 31 131 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst4g00059 Spst-Chr4 675381 678944 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst4g00059 205 510 WRKY Transcription Factor Family AT5G45050 26.087 4.00e-07 52.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst4g00059 - - vra:106774688 1464.13