Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst4g00057 ATGCCTGGAGTGAGCAGCAAAAGGAGGCTACATTTTAGCAAACTGTACAGTTTTTCTTGTTTGAAATCTCCTTTCAGAGATGGTCATTCCCAAATTGGGCAGAAGGGTTACTCAAGGGTTGTGTACTGCAATGATCCGGATAACCCTGAAGCAGTTCAGTTGAGTTATGGAGGCAATTATGTTTCAACAACCAAGTATACAGCTTTTAATTTTATCCCCAAGTCTTTGTTTGAGCAGTTCAGGAGGGTTGCAAATATCTACTTTCTCATTGTTGCGTGTGTTTCATTTAGTCCATTGGCACCTTTTACTGCTCTAAGTATTGTTGCTCCATTGGTGGTTGTGATTGGAGCTACTATGGCCAAGGAAGCTGTGGAAGATTGGAGGAGGAGAAAACAGGATATAGAAGCAAACAACCGAAAGGTTCAGGTATATGGTAGAAATTATACATTTGTGGAGACTAGATGGGAGAAACTCCGTGTTGGTGATATCATTAAAGTGTATAAGGATGAGTACTTTCCTGCTGATCTTCTTCTGCTTTCATCAAGCTATGGTGACGGGGTTTGTTATGTTGAGACTATGAATCTTGATGGAGAAACTAATCTAAAACTAAAGCATGCCTTGGAGGTGACAATCCATCTTCATGATGAAAAATCTCTCCAAAAGTTTAGGGCTGTGGTTAAATGTGAGGATCCGAATGAAAATCTGTACTCATTTATTGGAACCTTACAATATGATGGTAAAGACTATCCTCTTTCCTTGCAGCAGATCCTGTTAAGAGATTCTAAGCTGAAAAACACTGATTATATCTATGGTGTTGTTATCTTTACTGGCCATGATACAAAAGTTATGCAGAATTCCGTTGATCCTCCATCCAAGAGAAGCAAAATTGAGAGGAAAATGGATAAGATAATCTACATTCTCTTCAGTACCTTGGTTTTGATATCCTTTATTGGTTCTGTCTTTTTTGGTGTTGAGACCAAAAGGGATATTAGTGGTGGAAGGTATAGAAGATGGTATCTTCGTCCAGACAATGCAACGGTGTTCTATGATGCTAATAGGGCAACACTTGCGGCTGTTCTTCATTTTTTGACAGCCATTATGCTGTATGGATATCTAATTCCGATATCACTTTATGTCTCCATAGAAATTGTGAAAGTTCTGCAGAGCATTTTCATCAACCAAGACCAAGAAATGTATTATGAAGAATCAGATAGGCCAGCTCATGCACGCACATCTAATTTGAATGAGGAACTTGGTCAGGTAGATACAATACTGAGTGACAAAACTGGTACTTTGACATGTAATTCAATGGAGTTTGTCAAATGTTCAATAGGGGGCATTCCATATGGTCGTGGTATGACAGAAGTGGAGAAGGCACTTGCTAAGAGAGGAAAAGGAGGGGAGTCTGATTTTGATGGTGGATCATCTGATTTCTCAGGCCAGAATAATGAGGCAGTGGACTCTCTGCATCCAATTAAGGGCTTTAACTTCAGAGATGAGCGCATAGTGAATGGGCAATGGGTTAATGAACCATATCCTGAATACATACAGAGATTTTTTCGAGTTTTAGCTATTTGTCACACAGCTATTCCAGATGAAGATAAAGAGTCAGGAGAAATTTCCTATGAAGCAGAGTCACCAGATGAAGCAGCTTTTGTCATAGCTGCAAGGGAGCTCGGTTTTGAGTTTTTTGCAAGGACACAAACAAGCATATCATTGCACGAGCTGAATTATGAAAGTGGAAAAAAGGTTGACAGAGTGTACCAGCTTCTGCATGTCTTAGAGTTCAGCAGTTCCCGCAAAAGAATGTCAGTGATAGTGAGGAACGATGAAAATCAATTATTGCTCTTATGCAAGGGTGCAGACAGCGTAATGTTTGAAAGACTCTCACAACATGGAAGACAGTTTGAGGCTGAAACCAGGGATCATATCAAAAGATATGCCGAGGCTGGTTTAAGGACCCTGGTAGTCACATATCGTGAACTTGATGAAGAAGAATATAAATTATGGGACAAGGAGTTTTCAAGGATCAAAGCTTCTATAACAGAAGATCGAGATACACTGGTGGATGCAGCTGCTGATAAGATGGAAAGAGATTTGATACTTCTTGGTGCTACTGCAGTTGAGGATAGACTGCAAAAGGGGGTTCCTGAGTGTATTGAAAAGCTTGCGCGGGCAAAAATCAAATTATGGGTATTGACCGGAGACAAGATGGAAACTGCAGTCAACATAGGGTATGCTTGTAGTTTACTTAGACAAGACATGAAACAGATAGTGATCACTCTTGATTCCCCAGATATCCTATACTTGGAAAAACAAGGGGACAAGCAGGCTCTAGCAAAGGCTTCTCTTGAAAGCATTAAGAAGCAAATTGGAGAAGGAATATCGCAAATCAACTCTGCCAAAGAGAGTTCTGATACAAATAAAGGAAGTTCTTCTGGGTTTGGCTTGATAATCGATGGGAAGTCCTTGGATTATTCTCTTAACAAGAATTTGGAAAGGTCCTTCTTTGAGCTGGCCATTAATTGTGCTTCTGTCATATGTTGCCGATCTTCACCCAAACAAAAAGCTCGTGTTACAAGATTGGTAAAATTGGGAACAGGGAAGACAATATTATCTATTGGTGATGGGGCAAATGATGTTGGCATGCTTCAGGAGGCTGATATTGGAGTTGGCATTAGCGGTGTTGAAGGGATGCAGGCTGTAATGGCAAGTGATTTTTCAATAGCTCAATTCCGGTTTCTTGAGCGGTTGTTGTTGGTACATGGCCATTGGTGTTATCGGCGTATATCAATGATGGCATATGCTTCTTTCTCTGGTCAAGCTGCTTACAATGATTGGTACATGTCATTTTACAATGTCTTCTTCACTTCACTTCCAGTAATCGCTCTAGGTGTTTTTGATCAGGATGTTTCCGCCAAACTTTGCCTAAAGTATCCCTTTCTATATCTAGAGGGAGTAGAAGACATTCTGTTCAGTTGGCCCCGGATTCTTGGCTGGATGTTGAATGGAGTCCTTAGTTCTTTAGTGATCTTCTTCTTAACCACTAATTCTGTCTTGAATCAAGCCTTCAGAAGAGATGGTAAGGTGGTTGATTTTGAAATACTTGGGGTCACAATGTATACATGTGTGGTGTGGACTGTGAATTGCCAAATGGCACTATCCATCAACTACTTTACTTGGATACAACATTTTTTTATATGGGGCAGTATCGCCTTCTGGTATGTATTTGTGTTGATCTATGGTTACCTCTCCCCAGAAATATCCACAACAGCTTACAGGGTTTTTGTGGAGGCATGCGCTCCCAGTGGTCTATATTGGCTAGTTACCCTTTTGGTTGTTGTGTGTGTGCTTCTACCTTATTTCTCCTATAGGTCTTTCCAAAGTCGGTTTCTTCCAATGTACCATGATATTATACAGAGAAAACAAGTAGAAGGGATTGAAATAGGCTTATCTGATGATGAGTTACCTAAAAAGGTCCAGGGCAAACTAATACACCTGAGAGAGAGATTGAAGCAAAGGGAGTTGTGA 3531 0.4041 MPGVSSKRRLHFSKLYSFSCLKSPFRDGHSQIGQKGYSRVVYCNDPDNPEAVQLSYGGNYVSTTKYTAFNFIPKSLFEQFRRVANIYFLIVACVSFSPLAPFTALSIVAPLVVVIGATMAKEAVEDWRRRKQDIEANNRKVQVYGRNYTFVETRWEKLRVGDIIKVYKDEYFPADLLLLSSSYGDGVCYVETMNLDGETNLKLKHALEVTIHLHDEKSLQKFRAVVKCEDPNENLYSFIGTLQYDGKDYPLSLQQILLRDSKLKNTDYIYGVVIFTGHDTKVMQNSVDPPSKRSKIERKMDKIIYILFSTLVLISFIGSVFFGVETKRDISGGRYRRWYLRPDNATVFYDANRATLAAVLHFLTAIMLYGYLIPISLYVSIEIVKVLQSIFINQDQEMYYEESDRPAHARTSNLNEELGQVDTILSDKTGTLTCNSMEFVKCSIGGIPYGRGMTEVEKALAKRGKGGESDFDGGSSDFSGQNNEAVDSLHPIKGFNFRDERIVNGQWVNEPYPEYIQRFFRVLAICHTAIPDEDKESGEISYEAESPDEAAFVIAARELGFEFFARTQTSISLHELNYESGKKVDRVYQLLHVLEFSSSRKRMSVIVRNDENQLLLLCKGADSVMFERLSQHGRQFEAETRDHIKRYAEAGLRTLVVTYRELDEEEYKLWDKEFSRIKASITEDRDTLVDAAADKMERDLILLGATAVEDRLQKGVPECIEKLARAKIKLWVLTGDKMETAVNIGYACSLLRQDMKQIVITLDSPDILYLEKQGDKQALAKASLESIKKQIGEGISQINSAKESSDTNKGSSSGFGLIIDGKSLDYSLNKNLERSFFELAINCASVICCRSSPKQKARVTRLVKLGTGKTILSIGDGANDVGMLQEADIGVGISGVEGMQAVMASDFSIAQFRFLERLLLVHGHWCYRRISMMAYASFSGQAAYNDWYMSFYNVFFTSLPVIALGVFDQDVSAKLCLKYPFLYLEGVEDILFSWPRILGWMLNGVLSSLVIFFLTTNSVLNQAFRRDGKVVDFEILGVTMYTCVVWTVNCQMALSINYFTWIQHFFIWGSIAFWYVFVLIYGYLSPEISTTAYRVFVEACAPSGLYWLVTLLVVVCVLLPYFSYRSFQSRFLPMYHDIIQRKQVEGIEIGLSDDELPKKVQGKLIHLRERLKQREL 1176
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst4g00057 1176 Gene3D - 111 287 - -
Spst4g00057 1176 Pfam Phospholipid-translocating ATPase N-terminal 41 104 IPR032631 -
Spst4g00057 1176 Gene3D - 703 914 IPR023214 -
Spst4g00057 1176 Coils Coil 117 137 - -
Spst4g00057 1176 FunFam Phospholipid-transporting ATPase 545 703 - -
Spst4g00057 1176 ProSitePatterns E1-E2 ATPases phosphorylation site. 427 433 IPR018303 -
Spst4g00057 1176 FunFam Phospholipid-transporting ATPase 702 914 - -
Spst4g00057 1176 Pfam Phospholipid-translocating P-type ATPase C-terminal 935 1133 IPR032630 -
Spst4g00057 1176 Gene3D - 549 702 IPR023299 GO:0000166
Spst4g00057 1176 Pfam E1-E2 ATPase 137 330 - -
Spst4g00057 1176 NCBIfam phospholipid-translocating P-type ATPase 56 1141 IPR006539 GO:0000287|GO:0005524|GO:0015914|GO:0016020|GO:0140326
Spst4g00057 1176 CDD P-type_ATPase_APLT_Dnf-like 58 1015 - -
Spst4g00057 1176 SUPERFAMILY Calcium ATPase, transmembrane domain M 50 1132 IPR023298 -
Spst4g00057 1176 FunFam Phospholipid-transporting ATPase 117 287 - -
Spst4g00057 1176 SFLD p-type atpase 407 925 IPR044492 -
Spst4g00057 1176 PANTHER PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE 38 1143 - -
Spst4g00057 1176 PRINTS P-type cation-transporting ATPase superfamily signature 874 893 - -
Spst4g00057 1176 PRINTS P-type cation-transporting ATPase superfamily signature 425 439 - -
Spst4g00057 1176 SFLD Haloacid Dehalogenase 407 925 - -
Spst4g00057 1176 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 502 667 IPR023299 GO:0000166
Spst4g00057 1176 NCBIfam HAD-IC family P-type ATPase 842 964 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Spst4g00057 1176 SUPERFAMILY HAD-like 420 929 IPR036412 -
Spst4g00057 1176 Pfam Cation transport ATPase (P-type) 526 631 - -
Spst4g00057 1176 SUPERFAMILY Calcium ATPase, transduction domain A 144 284 IPR008250 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst4g00057 Spst-Chr4 652072 661448 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst4g00057 10 1146 Primary Pumps ATPases AT3G25610 63.934 0.0 1551
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst4g00057 K01530 - gmx:100817020 2162.88