Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst4g00056 ATGCAGGCACAAACCCTAGGTGATTACCTGAATCTTAGAATCTATTTTGCTGGCTCAATCGCCAATGCCATATTGGTGTTGTTTGATGTTGGCAATTGTTACATTTATTTGTTGGCAATGAGTGATGCACAGACAGCTGGATTATTTTGGTTTGGCCTCGTCTATGTTGAGATATTGGAGATTGATGTGATGCCCTCTTCACCTACCTATCTTCATGCAGTGCTGAATGGGCTCCTCTGGTTCTTATCTCCTTCTGTTTTAGTTGTGTCATATGCAAACAGTTCCTGCTTCATTTGTTACACCTTACTGAATAACAAAAGAAAAATGGAGCATGTTTTGGAAAAAAGATTCCCTCTTAATGCAGAAGATTACAAGTTATATGAAGAAGTTGGTGAAGGCGTTAGTGCCTCTGTATACAGGGCTCTCTGTGTTCCACTCAATGAGATAGTTGCCATCAAGGTTCTCGATCTAGAGAAGTGCAATAATGATTTGGATGGAATTCGAAGAGAGGTTCAGACCATGAGCTTGATTGATCATCCAAATGTTTTACAGGCACATTGCTCTTTTACTACCGGACACAATCTATGGGTTGTAATGCCATACATGGCAGGGGGGTCTTGCCTTCATATAATGAAATCTGCCTATCCGGAGGGTTTTGAAGAACCTGTTATTGCTACTTTATTGCATGAAGTTCTCAAAGCTCTTGTCTATCTTCATGCCCATGGTCACATACATAGAGATGTTAAGGCTGGGAATATTCTACTTGATTCTAATGGTGCTGTCAAACTAGCTGACTTTGGAGTGTCAGCATGTATGTTTGATACTGGAGATAGGCAACGTTCAAGAAACACTTTTGTAGGAACACCATGCTGGATGGCTCCTGAAGTCATGCAGCAATTACATGGATATGATTTTAAAGCAGATATATGGTCATTTGGTATCACAGCACTCGAACTTGCTCATGGTCATGCCCCGTTTTCAAAGTATCCACCTATGAAAGTTTTGCTTATGACTTTACAAAATGCCCCTCCAGGTCTTGATTATGAAAGAGACAAGAGATTTTCAAAGGCTTTCAAGGAGTTGGTTGCCACCTGCTTAGTTAAAGATCCAAAAAAACGTCCAAGTTCAGAAAAGCTTTTAAAGCATCACTTCTTTAAACATGCACGTGCCAGCAAATATCTAGCTCGCACCATTCTAGATGGCCTTGCTCCTTTAGGAGATCGTTTTAGAACACTGAAGGCTAAAGAAGCAGATTTATTGGTGCAGAACAAGGCTCTTTATGAGGATAAGGATCAATTATCTCAGAAAGAATATATTCGAGGAATTAGTGCCTGGAATTTTAACCTGGAGGATTTAAAAAGTCAAGCTGCTCTTATTCAAGATGATGACATACCTAATGCAGAAGTGCCACAAAAGGATAAGAAGCAAGAGGACAGATCAGATGACTTCAGGGTTCCTGCAGAGGGTTTATCATCTGTAACAGCTAATCATTCAGATGAAGCACCCAGGCAGAACAAGGAGGATGCATTCAACAACCTTCAGGATTTGGAGGGTTCACTTGCTTCATTTCCTAGTAAACCTCTTCAAGCACTTAAAGGATGTTTTGATATGTGTGAGGATGACGTTAATAACAACAGTCCAAGAGATCTGGATCACGATTATGGAAATGAATGTTCTGGGCAAAGTTCTTCATTGCAACAAAATGCTATCACTCAGCAAAAAAAGTTTTCGAGTGGCTCTTTGCTACCTGATAATTTTCTTTATCCAAAAAAGGTTGTCACTGATGGGGACAGGGATTATCTACAAACAAAGTATTCTTCGGAGAGGAATCACAGTGGTCCATTGCAATATCGACAGAAGAGGGATACCAGCAATCTTCCATTGGTTGATGACACATCAGATGGAGCATTTGTCCAGCGTAGGGGACGGTTTAAGGTCACATCAGCAGATCTCAGTCCAATGGGTCCTTCGAACAATGCTTCTGGCCCAGTTGTTAGTCCTACCAGTCCACCAAATCAAAATCTCATGGCTGTGGCTATTCTTCCATCGCTGCAGTGCATCTTGCAGCAGAATGGTTTGCAGAGGGAAGAGATTATAAAATTAATAAAGTATGCAGAGCAATCTTCTGGTAAGAATGCAGAATCAGTGGAGGCAGGGACAGTTGATAGTTTGCAGGTACCTGCTACAAATAGGGAGCGAGAGCTGCATTTTCAGGTTATTCAACTACAACACAGCATTGGAAGCCTTGCTGAGGAATTACAAAGACAAAAGCTGAAAAATGTTCAGTTAGAGAAACAATTGAGCAGTATGATTAACAAAGTGGAGAAGTGA 2331 0.4088 MQAQTLGDYLNLRIYFAGSIANAILVLFDVGNCYIYLLAMSDAQTAGLFWFGLVYVEILEIDVMPSSPTYLHAVLNGLLWFLSPSVLVVSYANSSCFICYTLLNNKRKMEHVLEKRFPLNAEDYKLYEEVGEGVSASVYRALCVPLNEIVAIKVLDLEKCNNDLDGIRREVQTMSLIDHPNVLQAHCSFTTGHNLWVVMPYMAGGSCLHIMKSAYPEGFEEPVIATLLHEVLKALVYLHAHGHIHRDVKAGNILLDSNGAVKLADFGVSACMFDTGDRQRSRNTFVGTPCWMAPEVMQQLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQNAPPGLDYERDKRFSKAFKELVATCLVKDPKKRPSSEKLLKHHFFKHARASKYLARTILDGLAPLGDRFRTLKAKEADLLVQNKALYEDKDQLSQKEYIRGISAWNFNLEDLKSQAALIQDDDIPNAEVPQKDKKQEDRSDDFRVPAEGLSSVTANHSDEAPRQNKEDAFNNLQDLEGSLASFPSKPLQALKGCFDMCEDDVNNNSPRDLDHDYGNECSGQSSSLQQNAITQQKKFSSGSLLPDNFLYPKKVVTDGDRDYLQTKYSSERNHSGPLQYRQKRDTSNLPLVDDTSDGAFVQRRGRFKVTSADLSPMGPSNNASGPVVSPTSPPNQNLMAVAILPSLQCILQQNGLQREEIIKLIKYAEQSSGKNAESVEAGTVDSLQVPATNRERELHFQVIQLQHSIGSLAEELQRQKLKNVQLEKQLSSMINKVEK 776
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst4g00056 776 ProSiteProfiles Protein kinase domain profile. 124 385 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst4g00056 776 PANTHER SERINE/THREONINE-PROTEIN KINASE FRAY2 114 757 IPR047173 GO:0043539
Spst4g00056 776 FunFam serine/threonine-protein kinase BLUS1 isoform X1 205 438 - -
Spst4g00056 776 Gene3D Phosphorylase Kinase; domain 1 113 200 - -
Spst4g00056 776 SUPERFAMILY Protein kinase-like (PK-like) 121 386 IPR011009 -
Spst4g00056 776 MobiDBLite consensus disorder prediction 606 630 - -
Spst4g00056 776 ProSitePatterns Protein kinases ATP-binding region signature. 130 153 IPR017441 GO:0005524
Spst4g00056 776 MobiDBLite consensus disorder prediction 461 504 - -
Spst4g00056 776 MobiDBLite consensus disorder prediction 466 485 - -
Spst4g00056 776 MobiDBLite consensus disorder prediction 651 669 - -
Spst4g00056 776 MobiDBLite consensus disorder prediction 605 634 - -
Spst4g00056 776 CDD STKc_OSR1_SPAK 122 385 - -
Spst4g00056 776 Coils Coil 746 773 - -
Spst4g00056 776 Pfam Protein kinase domain 124 385 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst4g00056 776 FunFam Serine/threonine-protein kinase BLUS1 113 201 - -
Spst4g00056 776 MobiDBLite consensus disorder prediction 648 669 - -
Spst4g00056 776 SMART serkin_6 124 385 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst4g00056 776 Gene3D Transferase(Phosphotransferase) domain 1 205 420 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst4g00056 Spst-Chr4 625129 640574 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst4g00056 109 773 MAP Kinase Kinase Kinase Kinase AT5G14720 66.667 0.0 922
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE20-Fray Spst4g00056 Pkinase 4e-59 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst4g00056 K08835 - gmx:100778837 1211.82