Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst4g00045 ATGGACATTGATAATGATTTCACATTTTGTCAGGTCAGTGCACCTGCTGATCTGGAAACAAACAAGCTTACTTCAGATGTTGCTGGTATTTCCATTAAAGAAGAATCTTCAAATGCAATTTGTACTAGTCAGGATAGTGGTCTTTTTCTGTCCAATGATTCCAACTCGAAGGAGGCTATTGTTGGTTCATTGTCTTTCACCGTAACTAATACAACTTCAAGTCAGCCAAATGAATCCAGTCAATCCACCACATTGGTACCTCCTAGTAAGACTAGCAATTTGTCGATGAAGTTGCCAGAAGAAAAGAATTCTGCTAAGAAGCCGGTTCGGGCCAAAGTTCCCTTTGAAAAAGGCTACAGTCAAATGGACTGGCTTAAGCTCACCCGAACACATCCTGACCTTGCAGGTTTGAAAGGGCAATCAAACAAGAGACTTATTTCTATGGATGAAGTTAGAAAACACCAAACAGAGGGCCAAATGTGGACTGTATTAAAAGGCCGTGTTTACAATATATCTCCATATATGAAGTTTCACCCTGGAGGTGTTGATATGTTGATGAAGGCAGTAGGAAAAGATTGCACATCTTTATTCAATAAATACCATGCTTGGGTTAATGCCGAATTCTTATTGGAGAAATGCGTTGTGGGTACCTTAGATGAGAGTCAGTGA 669 0.4006 MDIDNDFTFCQVSAPADLETNKLTSDVAGISIKEESSNAICTSQDSGLFLSNDSNSKEAIVGSLSFTVTNTTSSQPNESSQSTTLVPPSKTSNLSMKLPEEKNSAKKPVRAKVPFEKGYSQMDWLKLTRTHPDLAGLKGQSNKRLISMDEVRKHQTEGQMWTVLKGRVYNISPYMKFHPGGVDMLMKAVGKDCTSLFNKYHAWVNAEFLLEKCVVGTLDESQ 222
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst4g00045 222 MobiDBLite consensus disorder prediction 70 99 - -
Spst4g00045 222 PRINTS Cytochrome B5 signature 168 178 IPR001199 -
Spst4g00045 222 PRINTS Cytochrome B5 signature 178 192 IPR001199 -
Spst4g00045 222 PRINTS Cytochrome B5 signature 206 218 IPR001199 -
Spst4g00045 222 ProSiteProfiles Cytochrome b5 family, heme-binding domain profile. 143 219 IPR001199 -
Spst4g00045 222 SMART Cyt_b5_2 146 219 IPR001199 -
Spst4g00045 222 MobiDBLite consensus disorder prediction 70 109 - -
Spst4g00045 222 FunFam Cytochrome b5 reductase 4 141 222 - -
Spst4g00045 222 SUPERFAMILY Cytochrome b5-like heme/steroid binding domain 143 221 IPR036400 -
Spst4g00045 222 ProSitePatterns Cytochrome b5 family, heme-binding domain signature. 174 181 IPR018506 GO:0020037
Spst4g00045 222 Pfam Cytochrome b5-like Heme/Steroid binding domain 148 218 IPR001199 -
Spst4g00045 222 Gene3D - 140 222 IPR036400 -
Spst4g00045 222 PANTHER CYTOCHROME B5 REDUCTASE 4 FAMILY MEMBER 1 221 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst4g00045 Spst-Chr4 509870 511546 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst4g00045 144 221 NADPH P450 reductases AT1G26340 42.308 5.68e-16 70.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst4g00045 - - gmx:100806129 352.829