Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst4g00043 ATGTCTCAGTGTTCTCTATCGCTGTTAGCTTCTGTCTCTGTGAACCCCAAAATGCAAACCCTCCTTTCTTTCTCACACTCTCCTTCAACTCCACATCTTCAAAACCTCACAACCAGGCCAAAGTTCCCTCCTCAGCTCCACCCCATCAATGCCCTCTCACTCCCCCCATCTCCGACTTTGCCCCTCACTGCCTCAAAGTCTTCTCCTTTCCTCATTTCCTCCCCTAAACTTTCATCTTTCAGGATCCTTGCTGCCTCCATCCCTGATGCTAGAAGTGATGAACCTACCAAAACCACTGGCTTGGTCAAGACCCTGCAACTTGGAGCCATGCTTGCACTTTGGTACCTCTTGAACATCTACTTCAACATCTACAACAAGCAGGTTCTAAAAGTCTATCCATTTCCAGCAACAGTTACAGCATTTCAATTTGGCTTTGTGTCATTGGTGATTAATTTAATCTGGACCTTCAATCTCCATCTCAGACCAAGCATCAGTGGTTCACAGCTTGTAATAACACTCCTTCCAATGGCTGTGGCTCACACATTGGGGAACCTCTTGACCAACATTAGTCTTTGCAAGGTTGCTGTATCTTTCACTCACACAATCAAAGCCATGGAACCTTTCTTTACTGTTCTTCTTTCTGCCCTTTTCCTGGGTCAGAGGCCTACTTTCTGGGTGTTTTCTTCCCTTATGCCAATTGTTGGGGGGGTGGCATTGGCATCAATGACTGAAGTCTCTTTCAATTGGATCGGATTCACCACTGCTATGGCAGCTAACATTACAAATCAATCACGGAACGTTTTGAGCAAAAAAATGATGACTAGTGAAGAGGAAACTTTGGACACTATCAATCTCTATGGAGTTACAACGATCATTTCCTTCATCCTGTTGGTTCCATTTGCCTTACTTGTGGAGGGTGTCAAGTTTTCTCCTTCATACCTGCAATATGCTATGGTATCACCAGTGACACACTCAGTTGCAAACAGTGTGAAGCGTGTGGTTATCATTGTTTCCTCAGTCATCTTCTTTCAAACTCCCGTCTCTCTTGTTAATGCACTTGGGTACCGCTACTACTTGTAA 1080 0.4463 MSQCSLSLLASVSVNPKMQTLLSFSHSPSTPHLQNLTTRPKFPPQLHPINALSLPPSPTLPLTASKSSPFLISSPKLSSFRILAASIPDARSDEPTKTTGLVKTLQLGAMLALWYLLNIYFNIYNKQVLKVYPFPATVTAFQFGFVSLVINLIWTFNLHLRPSISGSQLVITLLPMAVAHTLGNLLTNISLCKVAVSFTHTIKAMEPFFTVLLSALFLGQRPTFWVFSSLMPIVGGVALASMTEVSFNWIGFTTAMAANITNQSRNVLSKKMMTSEEETLDTINLYGVTTIISFILLVPFALLVEGVKFSPSYLQYAMVSPVTHSVANSVKRVVIIVSSVIFFQTPVSLVNALGYRYYL 359
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst4g00043 359 PANTHER SOLUTE CARRIER FAMILY 35 107 355 - -
Spst4g00043 359 Pfam Triose-phosphate Transporter family 105 315 IPR004853 -
Spst4g00043 359 SUPERFAMILY Multidrug resistance efflux transporter EmrE 147 243 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst4g00043 Spst-Chr4 485731 489785 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst4g00043 18 354 Antiporters AT5G33320 49.235 2.86e-105 313
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst4g00043 K15283 - gmx:100819280 474.552