Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst4g00028 ATGAATACAACGCCTTTTATGGACAAGCAGATTATGGATCTCACTCACGGATCTTCCACTACTCAGCAACACAGCAAGGACTTCATCGACCTCATGAAACACGAACCATCGCAGCAACATCATCATCATCTTCGCGAAGGAGACGATGATGAACAAGAAGAAAAAGCACGTGACAACGGAATCAACAGAGACGAAATCGTTCCCAGTTACGATTTCCAGCCTATTCGCCCTCTCACCGCTTCCAGTTACGATTCCGCCCCTAATTTCTCTGCCGCATTCTCTCGCCCTTGGAATTCCGATTCCAACTCTAAAAATTACAGTTCTCTGGATTCAGTGGAACCTGCAAAAGTGATTGTAGAAAAGGACCGAAGTGCTTCTGATACTTCAATATTGTCTGAGATTGATCGTACCATGAAGAAACATATGGAAAATATGCTTAATGTTCTGGAAGGTGTTAGTGCACGGTTAACACAACTAGAAACCAGAACCCACCATCTCGAAAATTCTGTGGATGATTTGAAGGTATCTGTTGGAAATAATCATGGTATCACTGATGGAAAATTGAGGCAGTTGGAGAATATTCTTCGAGAGGTGCAATCAGGGGTCATAATTGTCAAGGACAAGCAAGATATAATAATGCAAGCTCAAATGCAAGTGGCAAAGCTGCAAGTGTCCAAGACGGATCAGAAATCAGAAGTGCAAGCTAGTGCAATTACGGATCCTGTGCAGCAACCTGCTCCTGTTCAATCTCAACCACAGCTTCCTGCCCCTGCTAATCTTCCTCAATCAATTCCTGGTGTTCCTCCCCCTAATGCACCTCCTCAACCTCCTCCACAACAGGGTTTGCCTCCTCCACTTCAACAGGGCTTGCCACCTCCACCACCAAGTCAACTTCCAAACCAATTCTCTCCAAACCAAATCCAAGCTGCTTCTCAGAGAGATCCATACTTCCCACCACCTGTTCAGTCTCAGGAAACACCAAATCAGCAATACCAACTGCCTTTATCGCAGCCTCTAAATGCTCAGCCCGGGGCAGTAGTTCCACATCAGCAATATCAACAGACCCCACATCCGCAGTACTCTCAGCCTGCACCTCATCTACCTCAACAGCAGCTACCATCCCATCAAACCATGAATCCGTCTCAACTACAATCTTCACAGGGTCACCATGTTGAGGAACCACCTTATCCTCCTCAGAATTATCCTCCCAATGTCCGCCAGCCGCCATCTCAGCCACCCACCGGTCCTCCTCCTCAACAGTTCTATGGGACACCATCCCACACATATGAACCACCATCAAGCAGACCTGGTTCAGGCTATTCTTCTGGATATGGTACACTATCGGTCCCCCCTGAGCAGTATCGTTATGGTGGACCACCTCAGTATGGTGGCAATCCTGCACTGAAACCACAACAACTACCAACTTCTTCAGTCTCTCCAAGTGGTGGAGGCAGCTACCCTCAGCCCCCAACTGCCAGGATACTCCCACAAGCACTACCTACTGCATCTGCAGTTAGTGGCAGCTCTGGTTCTGCTGGAACTGGAGGAAGGGTTTCCGTGGATGATGTGGTGGACAAAGTTGCCAGTATGGGATTCCCCAGAGACCATGTGAGGGCCACAGTTCGGAAGCTGACAGAGAATGGTCAGTCTGTTGACCTCAATGCAGTGCTGGATAAGCTCATGAATGATGGTGATGTTCCACCCCCACGAGCTTGGTTTGGTCGGTAG 1728 0.4821 MNTTPFMDKQIMDLTHGSSTTQQHSKDFIDLMKHEPSQQHHHHLREGDDDEQEEKARDNGINRDEIVPSYDFQPIRPLTASSYDSAPNFSAAFSRPWNSDSNSKNYSSLDSVEPAKVIVEKDRSASDTSILSEIDRTMKKHMENMLNVLEGVSARLTQLETRTHHLENSVDDLKVSVGNNHGITDGKLRQLENILREVQSGVIIVKDKQDIIMQAQMQVAKLQVSKTDQKSEVQASAITDPVQQPAPVQSQPQLPAPANLPQSIPGVPPPNAPPQPPPQQGLPPPLQQGLPPPPPSQLPNQFSPNQIQAASQRDPYFPPPVQSQETPNQQYQLPLSQPLNAQPGAVVPHQQYQQTPHPQYSQPAPHLPQQQLPSHQTMNPSQLQSSQGHHVEEPPYPPQNYPPNVRQPPSQPPTGPPPQQFYGTPSHTYEPPSSRPGSGYSSGYGTLSVPPEQYRYGGPPQYGGNPALKPQQLPTSSVSPSGGGSYPQPPTARILPQALPTASAVSGSSGSAGTGGRVSVDDVVDKVASMGFPRDHVRATVRKLTENGQSVDLNAVLDKLMNDGDVPPPRAWFGR 575
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst4g00028 575 MobiDBLite consensus disorder prediction 248 300 - -
Spst4g00028 575 MobiDBLite consensus disorder prediction 36 64 - -
Spst4g00028 575 MobiDBLite consensus disorder prediction 36 73 - -
Spst4g00028 575 MobiDBLite consensus disorder prediction 421 448 - -
Spst4g00028 575 Pfam UBA-like domain (DUF1421) 520 564 IPR010820 -
Spst4g00028 575 MobiDBLite consensus disorder prediction 301 389 - -
Spst4g00028 575 MobiDBLite consensus disorder prediction 1 24 - -
Spst4g00028 575 PANTHER RECEPTOR-LIKE KINASE, PUTATIVE (DUF1421)-RELATED 1 574 - -
Spst4g00028 575 MobiDBLite consensus disorder prediction 468 486 - -
Spst4g00028 575 MobiDBLite consensus disorder prediction 395 420 - -
Spst4g00028 575 MobiDBLite consensus disorder prediction 501 515 - -
Spst4g00028 575 Coils Coil 142 162 - -
Spst4g00028 575 MobiDBLite consensus disorder prediction 240 518 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst4g00028 Spst-Chr4 336412 339726 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst4g00028 1 317 Trihelix Transcription Factor Family AT5G14540 43.750 1.05e-68 230
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst4g00028 - - gmx:100777464 743.421