Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst4g00004 ATGGCCATGCTTTTCTATGCAGCACTCTTCTGCATCACATACTTCTTCCACCGGAGACTGTGTTGCAGATACCAGCTCTTCACTGACTACCCCATCCTTGGCAAGCTACCACAGTTAATCTGCAATCTGTGGCGTGTCCATGATTTTTCAGTTGAGGTCCTCAAATTTCACGGGGGAACTTGTGAGTTCACTGGACCTTGGTTTACCAACATGAACTATTTGGTCACTAGTGACCCCCTCAACGTGCACCATGTCTTCAGCAAAAATTTCAACAACTACGTCAAGGGACCCGAGTTTCGTGAGATTTTTCAGGCTTTCGGAGATGGGATATTCACTTCTGATGCAGAAGCATGGAAATACAACAGGAACCTCTTCCATTCCCTCTTTAAAAACAGAAGCTTCGAGATGTTTCTAGAGAAAATCATTCGGAAGAAGGTGCAGAATAGCCTACTTCCCATGTTGGATTATCTACATCAACAAGGGAAGGTGGTGGATCTTCAAGATGTCTTCAATCGCTTCACTTTCGATAACATATGTTCTATCGTTCTTGGATATGACCCAAATTGCCTTTCCGTTGATTTTCCAGAAGTTGCAATTGAGAAGGCTTTTAACCAAGCGGAAGAGTCCATATTCTACCGACATACAATGCCAAAGCGTATCTGGAAGCTGCAGAAATGGCTTCAAATCGGTCACGAGAAGAAGATGGCTGAAGCATGCAAAACGTTTGATCAATTCATCCATGCACTTATAGCGTCTAGGTCGGAAGCACTAGGCAAGTACAATAACAATGAAACAGGAGGACCTTGTGCGGATTTGCTAACAACTTTGATGAGAGAAGGGAAGGAACAACATGATGCTGTATTTCTAAGGGATGCTGTGTTCAATCTTTTTGTGGCTGGGAGGGATACCATAACTTCAGCTCTCACGTGGTTCTTTTGGCTTGTTGCTACCAATCCTTTGGTGGAAGCCAAGATTCTTGAAGAGATGAATGACATGTTTGGATCAAATGAGAAGGCACTAGATGATTTAAGTGTGGAGGAAGTGAAAAAACTGGTTTATCTGCACGGTGCCATATGTGAAACACTGAGACTCTTTCCTCCTATACCTTTCGAACGCAAGCAAGCAGTTGAGGCTGACATGCTTCCTAGTGGTCATGGTGTTAATCCCAGAGCAATGTTAATATTTTCATTGTATGCAATGGGAAGATTTGAGGAAATATGGGGAGAAGATTGCATGGAGTTCAAGCCAGAGAGATGGATATCAAAGAAAGGAGGTAATGTTTATGTACCATCTTACAAATTCATTGCTTTTAATGCAGGACCCAGAACATGCTTAGGTAAAGACTTGTCCTTCATTCAAATGAAGATTGTAGCAACTTCTGTCCTGCGCAATTATCAAATCCAAGTGGTGGAAGGTTTTGTTGCAAGGCCAAGCCTTTCAGTTGTTCTTCTCATGAAGGATGGTTTGAAGGTTAAGATAACAAAAAGAGAAACTTAA 1497 0.4228 MAMLFYAALFCITYFFHRRLCCRYQLFTDYPILGKLPQLICNLWRVHDFSVEVLKFHGGTCEFTGPWFTNMNYLVTSDPLNVHHVFSKNFNNYVKGPEFREIFQAFGDGIFTSDAEAWKYNRNLFHSLFKNRSFEMFLEKIIRKKVQNSLLPMLDYLHQQGKVVDLQDVFNRFTFDNICSIVLGYDPNCLSVDFPEVAIEKAFNQAEESIFYRHTMPKRIWKLQKWLQIGHEKKMAEACKTFDQFIHALIASRSEALGKYNNNETGGPCADLLTTLMREGKEQHDAVFLRDAVFNLFVAGRDTITSALTWFFWLVATNPLVEAKILEEMNDMFGSNEKALDDLSVEEVKKLVYLHGAICETLRLFPPIPFERKQAVEADMLPSGHGVNPRAMLIFSLYAMGRFEEIWGEDCMEFKPERWISKKGGNVYVPSYKFIAFNAGPRTCLGKDLSFIQMKIVATSVLRNYQIQVVEGFVARPSLSVVLLMKDGLKVKITKRET 498
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst4g00004 498 PRINTS P450 superfamily signature 299 316 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst4g00004 498 PRINTS P450 superfamily signature 444 455 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst4g00004 498 PRINTS P450 superfamily signature 435 444 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst4g00004 498 PRINTS P450 superfamily signature 356 367 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst4g00004 498 SUPERFAMILY Cytochrome P450 30 496 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst4g00004 498 CDD CYP86A 61 489 - -
Spst4g00004 498 PRINTS E-class P450 group I signature 288 305 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst4g00004 498 PRINTS E-class P450 group I signature 444 467 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst4g00004 498 PRINTS E-class P450 group I signature 434 444 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst4g00004 498 PRINTS E-class P450 group I signature 355 373 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst4g00004 498 PRINTS E-class P450 group I signature 308 334 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst4g00004 498 Gene3D Cytochrome P450 25 498 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst4g00004 498 Pfam Cytochrome P450 29 491 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst4g00004 498 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 437 446 IPR017972 GO:0005506|GO:0016705
Spst4g00004 498 PANTHER CYTOCHROME P450 20 490 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst4g00004 Spst-Chr4 35340 36836 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst4g00004 8 496 Cytochrome P450 AT4G39490 45.793 1.51e-163 471
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst4g00004 - - gmx:100779590 800.431