Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst4g00002 ATGAACCTCTATCTACTTTGTCGCAGATACCATACAATATCTTCAATAAATGCTATGCCCTACCTAGTCAAAATAAACATCTATCATTCTCTTCTCATTGTATTGTATAGGACAATAACATCCACAAGTGGCATAGAGATCCCACAAAACCCACGTAACAAACAAACATCTTCTCTTGTTTATCAAGTTACAATGCCACCGTTGTTACTTGGCTATGCAGCAGCAACGATTGCAGCACTCCTCTGCATCATAAACTTCTTCCATCGGAGACTATGTTGCAGACACCCCCTCTTAACTGACTACCCCTTCCTTGGCATGCTACCACAGTTTCTCAGCAATTTGTGGCGCTGCCATGATTTTTTGACTGAGGTGCTGAAACAACATGGGGGAACCGGTGAGTTCACTGGACCATGGTTTACCAACATGAACTATTTGATCACTAGTGACCCCCTCAACGTGCACCACATCATGAGCAAGAGTTTCCACAACTACGTCAAAGGACCCGTGTTTCGTGACATTTTTCAAGCCTTCGGACACGGGATTTTCACCGCTGATTCAGAGACATGGAAATACAACAGGGAACTCTTCCATTCTCTCTTTAAACAGAAAAGCTTTGAGGTCTTTCTACAGAAAACCATTCACAAGAAGGTGCAGAATAGCCTACTTCCCGTATTGGATCATCTACACCAACAGGGGACCGTGGTGGATCTTCAAGATGTCTTCAATCGCTTCACTTTCGATAACATATGTTCTATAGTTCTTGGCAATGACCCTAATTGCCTTTCCGTTGGTTTTCCGGATGTTGAAATTGAGAAGGCTTTTAATGAAGCAGAAGAGTCCATATTCTACAGACATGTAGTGCCAGGGTGTGTTTGGAAGTTGCAGAAACGGCTTCAGATTGGTCAAGAGAAGAAGATGACAGAAGCATGTAAAACACTTGATGAGTTCATATACGAATGCATAGCGTCTAAGAGAGAAGATATAAGCAAATACAAAGAAAATGAAACGGGAGAAGCCTTTCACGTGGACTTGTTAACAAATTTGATGAGAGAAGGAAAGGGAAAAGGGCAAGCACATGATGATATATTTCTAAGGGATGCTGTGTTCAATCTATTTGTGGCTGGGAGAGATACCATAACTTCGGCTCTCACTTGGTTCTTTTGGCTTGTTGCTACAAACCCTTTGGTGGAAGCCAAGATTCTTCAAGAGATCAATGAGATGTTTGGAAACAACGAAAAAACGCCTGGGGTTTTAAACGTGGAGGAGGTGAAAAAGCTGGTTTATCTGCATGGTGCTATATGTGAAGCATTGAGGCTTTTTCCTCCCATACCTTTCGAACGAAAGCAAGCACTTGAAGCTGACGTGCTTCCTAGTGGTCATGCTGTGAATCCCAGTACAATCATATTATTTTGTTTATATTCAATGGGAAGATTTGAGGAAATATGGGGAGAAGATTGTATGGAGTTCAAACCAGAGAGATGGATCTCACATAAAGGAGGTAATGTTTATGTACCATCTTACAAATTCATTGCTTTTAATGCAGGACCAAGGATTTGTTTGGGCAAAGACTCGTCCTTCATTCAAATAAAGATGGTGGCAACTGCAATCTTGCAGAAGTATCGTGTCCAAGTGGTTGAAGGTCATGATGCTTCTCCAAACCTTTCAATCGTTCTTCTAATGAAGAATGGTTTAAAGGTTAGGATAACAAAGAGAGAAATTTAA 1722 0.4129 MNLYLLCRRYHTISSINAMPYLVKINIYHSLLIVLYRTITSTSGIEIPQNPRNKQTSSLVYQVTMPPLLLGYAAATIAALLCIINFFHRRLCCRHPLLTDYPFLGMLPQFLSNLWRCHDFLTEVLKQHGGTGEFTGPWFTNMNYLITSDPLNVHHIMSKSFHNYVKGPVFRDIFQAFGHGIFTADSETWKYNRELFHSLFKQKSFEVFLQKTIHKKVQNSLLPVLDHLHQQGTVVDLQDVFNRFTFDNICSIVLGNDPNCLSVGFPDVEIEKAFNEAEESIFYRHVVPGCVWKLQKRLQIGQEKKMTEACKTLDEFIYECIASKREDISKYKENETGEAFHVDLLTNLMREGKGKGQAHDDIFLRDAVFNLFVAGRDTITSALTWFFWLVATNPLVEAKILQEINEMFGNNEKTPGVLNVEEVKKLVYLHGAICEALRLFPPIPFERKQALEADVLPSGHAVNPSTIILFCLYSMGRFEEIWGEDCMEFKPERWISHKGGNVYVPSYKFIAFNAGPRICLGKDSSFIQIKMVATAILQKYRVQVVEGHDASPNLSIVLLMKNGLKVRITKREI 573
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst4g00002 573 SUPERFAMILY Cytochrome P450 100 571 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst4g00002 573 Gene3D Cytochrome P450 86 573 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst4g00002 573 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 512 521 IPR017972 GO:0005506|GO:0016705
Spst4g00002 573 Pfam Cytochrome P450 100 562 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst4g00002 573 PRINTS E-class P450 group I signature 509 519 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst4g00002 573 PRINTS E-class P450 group I signature 383 409 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst4g00002 573 PRINTS E-class P450 group I signature 363 380 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst4g00002 573 PRINTS E-class P450 group I signature 519 542 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst4g00002 573 CDD CYP86A 133 564 - -
Spst4g00002 573 PRINTS P450 superfamily signature 519 530 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst4g00002 573 PRINTS P450 superfamily signature 374 391 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst4g00002 573 PRINTS P450 superfamily signature 510 519 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst4g00002 573 PRINTS P450 superfamily signature 431 442 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst4g00002 573 PANTHER CYTOCHROME P450 89 566 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst4g00002 Spst-Chr4 13390 15111 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst4g00002 79 571 Cytochrome P450 AT4G39490 47.266 2.15e-165 479
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst4g00002 - - gmx:100792360 837.795