Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst4g00001 ATGGCCATGTTTTGGTATGCAGCAGCAACAACTGCAGCACTCTTCTGCATCATACACTTCTTTCGTCGGAGACTATGTTGCAGATACCCTCTCTTCACTGACTACCCCTTCCTGGGCATGCTACCACAGGTACTCTGCAATTTGTGGCGTATTCATGATTTTTCAGTTGAGGTCCTGAAATCACATGGTGGCACTGGTGAGTTCACAGGACCTTGGTTTACCAACATGAACTATTTGGTCACTAGTGACCCCCTCAACGTGCACCATGTCTTGAGCAAGAATTTCAACAACTACGTCAAGGGACCTGAGTTTCGTGAGATTTTTCAGGCTTTCGGAGATGGGATATTCACTTCTGATGCAGAAGCATGGAAATACAACAGGGATATCTTCCATTCCCTCTTTAAACACAGAAGCTTCGAGGTGTTCCTAGAGACAACCATTCGGAAGAAGTTGCAGAATAGCCTACTTCCCATGTTGGATTATCTACATCAACAAGGGAATGTGGTGGATCTTCAAGATGTCTTCAATCGCTTCACCTTCGACAACATATGTTCTATAGTTCTTGGATATGACCCCAATTGCCTTTCCGTTGATTTTCCAGAAGTTGAAATTGAGAAGGCTTTTAACCAAGCAGAAGAGTCCATAATCTACCGACATACAATGCCAAAGCGTCTTTGGAAGCTGCAGAAATGGCTTCAAATCGGTCACGAGAAGAAGATGACTGAATCGTGCAAAACGTTTGATCAATTCATCCATGCACTTATAGCGTCTAGGTCGGAAGCACTAAGAAAGTACAATAACAATGAAACAGGAGAAGCTTGTGCGGATTTGCTAACAACTTTGATGAGAGAAGGGAAAGAACAACATGATGCTAGATTTCTAAGGGATGCTGTGTTCAATCTTTTTGTGGCTGGGAGAGATACCATAACTTCAGCTCTCACATGGTTCTTTTGGCTTGTTGCTACCAATCCTTTGGTGGAAGCCAAGATTCTTGAAGAGATCAATGAAATTTTTGGATCAAATGAGAAGACACCAGATGATTTAAGTGTGGAGGAATTGAAAAAACTGGTTTATCTGCACGGTGCAATATGTGAAACACTGAGACTCTTTCCTCCTATACCTTTCGAACGCAAGCAAGCAGTAGAAGCTGACATGCTTCCTAGTGGTCATGGTGTTAATCCCAGAGCAATGTTAATATTTTCATTGTATGCAATGGGAAGATTTGAGGAAATATGGGGAGAAGATTGCATGGAGTTCAAGCCAGAGAGATGGATATCAAAGAAAGGAGGTAATGTTTATGTACCATCTTACAAATTCATTGCTTTTAATGCAGGACCCAGAACATGCTTAGGTAAAGACTTGTCCTTCATTCAAATGAAGATTGTAGCAACTGCTATCTTGCGCAATTTTCATATCCAAGTGGTGGAAGGTTGTGTTGCTTGGCCAAGCCTTTCAATTGTTCTTCTCATGAAGGATGGTTTGAAGGTTAAGATAACAAAAAGAGAAACTTAA 1512 0.416 MAMFWYAAATTAALFCIIHFFRRRLCCRYPLFTDYPFLGMLPQVLCNLWRIHDFSVEVLKSHGGTGEFTGPWFTNMNYLVTSDPLNVHHVLSKNFNNYVKGPEFREIFQAFGDGIFTSDAEAWKYNRDIFHSLFKHRSFEVFLETTIRKKLQNSLLPMLDYLHQQGNVVDLQDVFNRFTFDNICSIVLGYDPNCLSVDFPEVEIEKAFNQAEESIIYRHTMPKRLWKLQKWLQIGHEKKMTESCKTFDQFIHALIASRSEALRKYNNNETGEACADLLTTLMREGKEQHDARFLRDAVFNLFVAGRDTITSALTWFFWLVATNPLVEAKILEEINEIFGSNEKTPDDLSVEELKKLVYLHGAICETLRLFPPIPFERKQAVEADMLPSGHGVNPRAMLIFSLYAMGRFEEIWGEDCMEFKPERWISKKGGNVYVPSYKFIAFNAGPRTCLGKDLSFIQMKIVATAILRNFHIQVVEGCVAWPSLSIVLLMKDGLKVKITKRET 503
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst4g00001 503 Pfam Cytochrome P450 35 496 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst4g00001 503 PRINTS E-class P450 group I signature 360 378 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst4g00001 503 PRINTS E-class P450 group I signature 449 472 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst4g00001 503 PRINTS E-class P450 group I signature 313 339 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst4g00001 503 PRINTS E-class P450 group I signature 293 310 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst4g00001 503 PRINTS E-class P450 group I signature 439 449 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst4g00001 503 PRINTS P450 superfamily signature 440 449 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst4g00001 503 PRINTS P450 superfamily signature 304 321 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst4g00001 503 PRINTS P450 superfamily signature 449 460 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst4g00001 503 PRINTS P450 superfamily signature 361 372 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst4g00001 503 PANTHER CYTOCHROME P450 23 495 - -
Spst4g00001 503 Gene3D Cytochrome P450 28 503 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst4g00001 503 SUPERFAMILY Cytochrome P450 34 501 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst4g00001 503 CDD CYP86A 67 494 - -
Spst4g00001 503 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 442 451 IPR017972 GO:0005506|GO:0016705
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst4g00001 Spst-Chr4 10010 11521 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst4g00001 11 501 Cytochrome P450 AT4G39490 46.199 4.07e-166 478
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst4g00001 - - gmx:100779590 803.512