Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g05177 ATGAAGGTGAAGGATGGAATTTTGACATCAAAATTGTGTAGGCCAACATCATTTGGCGTAGTTAACAATACATGGAGAATATTCACGTACAAGGAGTTGCATGCGGCTACCAACGGATTCAGTGATGATAACAAGCTTGGTGAAGGTGGTTTTGGAAGTGTGTATTGGGGAAGGACCAGCGATGGTCTTCAGATAGCGGTAAAGAAACTGAAAGCAATGAACTCAAAGGCCGAGATGGAATTTGCTGTAGAAGTTGAAGTTCTTGGAAGGGTTAGGCACAAAAACTTGCTGGGTCTTAGGGGCTATTGTGTTGGGGATGATCAACGGCTCATAGTATATGATTACATGCCAAATCTCAGCCTGCTTTCTCATCTCCATGGCCAGTTTGCAGTTGATGTGCAACTTAACTGGCAGAGGAGAATGAACATTGCAATTGGCTCTGCAGAAGGCATTCTGTACTTGCACCGTGAGGTGACACCCCACATCATTCACAGGGACATCAAAGCTAGTAACGTGCTTCTGAATTCAGAGTTTGAGCCTCTAGTTGCAGATTTTGGGTTTGCAAAGCTAATCCCAGAAGGAGTTAGCCATATGACTACCCGTGTGAAGGGTACATTGGGATACTTGGCACCTGAATATGCGATGTGGGGCAAGGTCTCCGAAAGTTGTGATGTTTATAGCTTTGGAATTCTGCTCTTGGAACTTGTAACTGGTAGAAAGCCCATAGAGAAGCTCCCTGGTGGGCTAAAGAGAACGATAACCGAGTGGGCCGAGCCTCTAATAGCGAAAGGAAAGTTGAGGGACCTGGTTGATCCAAAACTGAGAGGGAACTTCGATGAAAACCAAGTAAAACAAGCAATCAATGTGGCTGCTCTTTGCGTGCAGAGTGAGGCCGAGAAACGACCCAACATGAAGGAAGTTGTTAACCTTCTTAAAGGGTTTGAATATGAAGAGAAGAAAGTGACTGTGACGAGGATAGATAGTATCAAGTATGATGAAGAACTATTGGCACTTGATCAGCTTAGCGATAAAGACCATGACGATGCAACTGCTAGTTATGGTGTTTTCAGTGCCATTGAAGTCCAAAAGATGAAGGATCCATATAAACGAATGGGCTAA 1119 0.4424 MKVKDGILTSKLCRPTSFGVVNNTWRIFTYKELHAATNGFSDDNKLGEGGFGSVYWGRTSDGLQIAVKKLKAMNSKAEMEFAVEVEVLGRVRHKNLLGLRGYCVGDDQRLIVYDYMPNLSLLSHLHGQFAVDVQLNWQRRMNIAIGSAEGILYLHREVTPHIIHRDIKASNVLLNSEFEPLVADFGFAKLIPEGVSHMTTRVKGTLGYLAPEYAMWGKVSESCDVYSFGILLLELVTGRKPIEKLPGGLKRTITEWAEPLIAKGKLRDLVDPKLRGNFDENQVKQAINVAALCVQSEAEKRPNMKEVVNLLKGFEYEEKKVTVTRIDSIKYDEELLALDQLSDKDHDDATASYGVFSAIEVQKMKDPYKRMG 372
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g05177 372 SUPERFAMILY Protein kinase-like (PK-like) 24 317 IPR011009 -
Spst3g05177 372 PANTHER OS01G0253100 PROTEIN 23 318 - -
Spst3g05177 372 FunFam PTI1-like tyrosine-protein kinase At3g15890 116 329 - -
Spst3g05177 372 Pfam Protein tyrosine and serine/threonine kinase 43 311 IPR001245 GO:0004672|GO:0006468
Spst3g05177 372 ProSitePatterns Protein kinases ATP-binding region signature. 46 69 IPR017441 GO:0005524
Spst3g05177 372 SMART serkin_6 40 311 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst3g05177 372 FunFam PTI1-like tyrosine-protein kinase At3g15890 13 115 - -
Spst3g05177 372 CDD STKc_IRAK 46 314 - -
Spst3g05177 372 Gene3D Phosphorylase Kinase; domain 1 16 115 - -
Spst3g05177 372 ProSiteProfiles Protein kinase domain profile. 40 314 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst3g05177 372 Gene3D Transferase(Phosphotransferase) domain 1 116 335 - -
Spst3g05177 372 ProSitePatterns Serine/Threonine protein kinases active-site signature. 162 174 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g05177 Spst-Chr3 103676957 103679024 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst3g05177 28 311 Trihelix Transcription Factor Family AT1G70460 50.000 1.67e-93 293
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-XV Spst3g05177 PK_Tyr_Ser-Thr 2.2e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g05177 - - gmx:100783365 672.93