Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g05149 ATGCGAAATATCAACTCGGTGAAGCGAGAATTCCTCAAAAAATGGATGTGGGGTATCAGAAAATACAGCTCTCAGAAGAAGAACATGAGTCTGTTGGAGAGAAAGAAAGCCATAAAGCTGTCAGCAGATTTGGCCATGGCTTCCACCAGAAACAAAACCACTCGCTGGAGCAAGGCCCTCATAGCCAATGCTTCCAAAGACGGCAACAACAAAGTCCACACGGAACACGTGCTAGGCTCATCACCACCGCCACGGAGGGTAAGGAAAAGCTCCACGAATTATTCCCACGGCACAAGGATCAGAAGCTGCAGAAACACCTGGAGGAGAAACCGTGCAGTCCACAGACCAAAGGATAGGTCGGTGGCGAGTTTCATTGCCAAGAAGCTGGTCCAGAAGAGAACCCGAAGGCTCAAGAGTCTCTTACCAGGAGGAGAATTCATGGACGGTGTGTCTCTGGTTGAAGAAACCCTAGATTATATACAATCACTGAAAGCTCAAGTTGAAGTAATGAGATGTCTTGTCACTGCCTCAGAGCTCATGATCCTCAATCCATCGTAA 558 0.4785 MRNINSVKREFLKKWMWGIRKYSSQKKNMSLLERKKAIKLSADLAMASTRNKTTRWSKALIANASKDGNNKVHTEHVLGSSPPPRRVRKSSTNYSHGTRIRSCRNTWRRNRAVHRPKDRSVASFIAKKLVQKRTRRLKSLLPGGEFMDGVSLVEETLDYIQSLKAQVEVMRCLVTASELMILNPS 185
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g05149 185 PANTHER TRANSCRIPTION FACTOR IBH1-LIKE 1 7 175 IPR044660 GO:0006355
Spst3g05149 185 MobiDBLite consensus disorder prediction 65 97 - -
Spst3g05149 185 CDD bHLH_AtIBH1_like 127 174 IPR044549 GO:0006355
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst3g05149 1 181 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G30410 39.153 2.13e-30 107
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g05149 - - pvu:PHAVU_003G151300g 303.138
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst3g05149 3 103279955 103280512 Spst3g05149 3 103279955 103280512 ECH