Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g05144 ATGGGTAGCTTAGCTAGTCATCTTCCTCTAATTATTATGGTAGGTCTGCAAATTCATTATGCAGCACTGGCCATCTTCACCAGAGCAGCCCTGTTAGATGGGTTGAGGACAACCGTTTTTGTAGTGTACAGGCAAGGCATAGCCACTTTGTCTCTGGCCCCTATGTTTTTCTCTCCAAAGAGAAGACAATCAATGAAAAGTTCTTTGGGATTCAGGAGTTTCTTTTTGATGTTTGTGACCGCTCTTGTTGGAGTCACAGCAAATCAGAATGCATATTTCAGAGGTTTATATTATTCATCTTCTACTGCAGCTACAGCAATGAGTAATCTGATACCTGCTTTAACGTTTGTAATCGCAGCAATAGCGGGATTTGAGAAAATTGAACTACGAAGTTTGAGAAGCTTGGCGAAGATATTGGGGACAGTTTGTTGCGTTGGTGGAGCCTTAACCATGGCATTGGTAAAAGGACATAAACTGTTGCACACGGAGTTCCTTCCTTCTATACATCTCACTGGCAGTGAAAGTGACGATTGGTTGCTGGGTTGTCTCTTGCTCTTAGCGAGCAGTGTTTTCTGGTCTTGTTGGATGATCCTCCAGGTACCAATCGCTACGTCTTGCCCAGACCATTTACTATCAACCTTTTGGATGTGTCTCTTTTCAACAATACAATCAGCCCTATTTGCACTACTCTCAGAGCCGGATCTTGAAGCATGGATTTTACATTCACCTTTGCAGATTTCATGTTCTTTATATGCGGGAATCGGAATAGCGGTTAGCTTCTTTATTCAATCCTGGTGCATCTCAGAAAGAGGTCCTCTGTACTGTGCAATGTTCAACCCATTAGCAACAGTAATCACTGCTTTGATAAGTGCAACATTCTTACAAGAAGAAGTATACATTGGAAGTTTGATAGGGGCTGTTGGAGTTATTGCTGGTTTATATATTGTGCTTTGGGGTAAAGCCAAAGAGTTTGCTGAGGTTAAACCAGAGGCACCACAATCAAACTTGCAAGATGACGAGATAAGTAGTAGGGTAGATTTGGAACAACCCCTCCTAGCAGAAAAATCTGAACATGTAACAGAAGCAGATAGCAAGGTGTAG 1101 0.4214 MGSLASHLPLIIMVGLQIHYAALAIFTRAALLDGLRTTVFVVYRQGIATLSLAPMFFSPKRRQSMKSSLGFRSFFLMFVTALVGVTANQNAYFRGLYYSSSTAATAMSNLIPALTFVIAAIAGFEKIELRSLRSLAKILGTVCCVGGALTMALVKGHKLLHTEFLPSIHLTGSESDDWLLGCLLLLASSVFWSCWMILQVPIATSCPDHLLSTFWMCLFSTIQSALFALLSEPDLEAWILHSPLQISCSLYAGIGIAVSFFIQSWCISERGPLYCAMFNPLATVITALISATFLQEEVYIGSLIGAVGVIAGLYIVLWGKAKEFAEVKPEAPQSNLQDDEISSRVDLEQPLLAEKSEHVTEADSKV 366
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g05144 366 SUPERFAMILY Multidrug resistance efflux transporter EmrE 215 321 - -
Spst3g05144 366 SUPERFAMILY Multidrug resistance efflux transporter EmrE 43 155 - -
Spst3g05144 366 Pfam EamA-like transporter family 180 317 IPR000620 GO:0016020
Spst3g05144 366 Pfam EamA-like transporter family 10 148 IPR000620 GO:0016020
Spst3g05144 366 PANTHER WAT1-RELATED PROTEIN 9 324 IPR030184 GO:0016020|GO:0022857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g05144 Spst-Chr3 103179686 103181716 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst3g05144 4 361 Nodulin-like Gene Family AT4G28040 45.404 6.49e-110 323
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g05144 - - gmx:100816384 630.557
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst3g05144 3 103179686 103181716 Spst3g05144 3 103179686 103181716 ECH