Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g05120 ATGGGTTTGTTTGGATTAACAGTGTTCCTATTTTTCTTTCTGGATTCTGTTCATTCTACTGTTCTTGGGGAAGAAAATGCTGGCATCGTGAATGGGAAAAAATCACTTATTTCATTCATGTCAGGCATTGTTTCAGACCCTCAAAACGCTCTAGAGAGTTGGAAGTCACCCGGTGTTCATGTTTGTGATTGGTCAGGTGTGAGATGCAACAATGCAAGTGACATGATCATAGAGCTTGATCTCAGCGGAAGGTCTCTAGGAGGCACCATTTCCCCTGCACTTGCTAACATCTCTTCCTTGCAAATTCTTGATCTTTCTGAGAACTTTTTGGTGGGTCGGATTCCAAAAGAACTAGGCCATTTGGTTCAGCTTGTACAACTCAGTTTGTCTGGGAATTTCCTTCAGGGGCACATTCCATCCGAGTTTGGTTCACTTCACAACTTGGACTACCTTGACTTGGGAAGCAATCATCTTGAGGGAGAGATTCCCCCATCACTCTTCTGCAATGGGACATCACTAGGTTATGTAGACCTCTCTAATAATTCCTTAGGGGGACAAATCCCCTTGAACAAAGGGTGTATTCTTAAAGAACTCAAGTTCCTGTTACTTTGGTCTAACAAGCTTGTAGGCAATGTTCCTTCAGCTCTTTCAAACTCTACCAAGCTAAAATGGCTTGATTTGGGGTTGAATATGTTGAGTGGAGAGCTTCCTTCTAAGATTGTAGGTAATTGGCCACAACTACAATTCCTCTACTTGTCATACAACAATTTTATTAGCCATGATGGTAATACCAACCTTGAGCCTTTCTTCGCCTCCTTGGTGAATTTATCATACTTTCAAGAACTTGAATTAGCGGGAAATAATCTTGGTGGGAAGCTGCCTCATAACATTGGTGATCTTCCTTCCAGCCTGCAACAACTTCACCTAGAAAAAAATCTCATATATGGCTCTATCCCTCCACATATTGCCAATCTTGTCAACCTGACTTTCTTGAAGTTGTCCAGTAACCTAATAAATGGATCAATCCCTCCCAGCCTCAGCCATATGAATAGGTTAGAAAGAATTTATTTGTCAAATAATTCACTATCTGGTGAGATTCCTTCAACCCTTGGTGACATTCAGCATCTGGGACTTCTAGACTTGTCAAGAAACAAGCTTTCTGGTCCAATACCAGATAGTTTTGCAAATCTCCCCCAGTTAAGAAGGCTTTTACTTTATGACAACCAGCTTTCTGGAACAATCCCTCCAAGTCTGGGAAAATGTGTCAATTTGGAGATTTTAGACTTATCTCACAACAATATAACTGGGCTGATTCCTGCCGAAGTTGCAGCCTTGGGTAGCTTGAAACTATACCTGAATTTATCAAACAATAACTTACAAGGGTCTTTACCATTAGAACTCAGCAAAATGGACATGGTTCTAGCTATTGATTTATCCATGAACAACCTCTCTGGCAGCATCCCACCACAACTGGAAAGTTGCATAGCACTGGAGTACCTCAACCTCTCTGGTAACTCCTTTGAAAACCCTCTCCCTTATTCATTAGGCCAATTGCTCTATATTAGAGCACTTGATGTGTCTTCAAATCAGTTGACCGGGGCAATACCAGAGTCCATGCAGTTGTCTCCCTCGCTGAAGGAACTTAATTTCTCTTTCAACAAATTCTCAGGGAAAGTGTCAAAAAAGGGAGCATTTTCAAATCTTACAATAGACTCTTTCCTGGGAAATGATGATCTCTGTGGCTCATTTAAAGGCATGCAACAATGTCACAAGAAATGTAGTTATCATTTAGTGTTCTTGTTAATTCCTGTGTTACTATTTGGCACCCCTTTCCTATGCATACTTTTTAGGTACTCAATGGTAATAAAGTCAAGAGTGAAAAAACGAATTGCAATTGTTAGTAGAGGTGATTTGGAGGATGTAGAAGAGGGAACAAAAGAGGTCAAGTACCCAAGAATTACATATGAACAGCTTAAAGAAGCCACTGGAGGCTTCAGTTCTTCAAGCTTAGTAGGTTCAGGCCGGTTTGGACAGGTCTACGAAGGAATGCTACAGGATAATACAAGAGTAGCCGTGAAAGTGTTGGATACAGCACATGGTGAGATTTCAAGGAGCTTTAGAAGGGAATGCCAAATACTGAAAAAGATAAGGCACAGAAATTTAATGAGGATCATAACAATTTGTTGTAGGCCAGAATTTAATGCTCTTGTTTTTCCCTTGATGCCAAATGGTAGCCTTGAGAGGCATCTATATCCAAGCCAAAGATTGAATGTGATTCAATTAGTAAGAATCTGCAGTGATGTTGCTGAGGGAATGGCCTATCTGCACCATTACTCTCCAGTGAAAGTGGTGCATTGTGATCTTAAGCCAAGCAATATACTCCTTGATGAAGATATGACAGCTTTGGTTACTGATTTTGGAATTTCAAGGCTTGTACAAAGTGATGAGAATACATCCACCAGCATCTCATCTTTCAGCTCAACACATGCCTTGTTATGTGGCTCGGTTGGTTACATAGCTCCTGAGTACGGAATGGGAAAAGATGCTTCAACTAAAGGTGATGTCTACAGTTTTGGAGTGCTTGTGTTGGAGATGGTCTCAGGTAGACGCCCCACAGATGTGCTCAGCCATGAAGGCTCAAGCTTGTGCGAATGGCTTAAAAAACTATACACACAACCACACCACCTTCAAAACTTTGTTCAACAAGCCCTTCAAAGGTGTTGTCCTTGTGGCCTGCCAAACCCTCACAACAAAGTTTGGAAAGATGTTATTCTGGAACTCATTGAGCTGGGGCTAATCTGCACTCAGCACCATCCTTCAACAAGACCAACCATGCACGACATAGCCCAAGAGATGGAGAGGTTGAAGGACTACGTCGTTAAGTCAACCTTCACCCGTCATTCAAGTCAATCCCAACATTAA 2922 0.4155 MGLFGLTVFLFFFLDSVHSTVLGEENAGIVNGKKSLISFMSGIVSDPQNALESWKSPGVHVCDWSGVRCNNASDMIIELDLSGRSLGGTISPALANISSLQILDLSENFLVGRIPKELGHLVQLVQLSLSGNFLQGHIPSEFGSLHNLDYLDLGSNHLEGEIPPSLFCNGTSLGYVDLSNNSLGGQIPLNKGCILKELKFLLLWSNKLVGNVPSALSNSTKLKWLDLGLNMLSGELPSKIVGNWPQLQFLYLSYNNFISHDGNTNLEPFFASLVNLSYFQELELAGNNLGGKLPHNIGDLPSSLQQLHLEKNLIYGSIPPHIANLVNLTFLKLSSNLINGSIPPSLSHMNRLERIYLSNNSLSGEIPSTLGDIQHLGLLDLSRNKLSGPIPDSFANLPQLRRLLLYDNQLSGTIPPSLGKCVNLEILDLSHNNITGLIPAEVAALGSLKLYLNLSNNNLQGSLPLELSKMDMVLAIDLSMNNLSGSIPPQLESCIALEYLNLSGNSFENPLPYSLGQLLYIRALDVSSNQLTGAIPESMQLSPSLKELNFSFNKFSGKVSKKGAFSNLTIDSFLGNDDLCGSFKGMQQCHKKCSYHLVFLLIPVLLFGTPFLCILFRYSMVIKSRVKKRIAIVSRGDLEDVEEGTKEVKYPRITYEQLKEATGGFSSSSLVGSGRFGQVYEGMLQDNTRVAVKVLDTAHGEISRSFRRECQILKKIRHRNLMRIITICCRPEFNALVFPLMPNGSLERHLYPSQRLNVIQLVRICSDVAEGMAYLHHYSPVKVVHCDLKPSNILLDEDMTALVTDFGISRLVQSDENTSTSISSFSSTHALLCGSVGYIAPEYGMGKDASTKGDVYSFGVLVLEMVSGRRPTDVLSHEGSSLCEWLKKLYTQPHHLQNFVQQALQRCCPCGLPNPHNKVWKDVILELIELGLICTQHHPSTRPTMHDIAQEMERLKDYVVKSTFTRHSSQSQH 973
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g05120 973 ProSiteProfiles Leucine-rich repeat profile. 423 444 IPR001611 GO:0005515
Spst3g05120 973 Pfam Leucine rich repeat 351 410 IPR001611 GO:0005515
Spst3g05120 973 ProSiteProfiles Protein kinase domain profile. 665 955 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst3g05120 973 Gene3D Ribonuclease Inhibitor 194 262 IPR032675 -
Spst3g05120 973 Gene3D Ribonuclease Inhibitor 31 193 IPR032675 -
Spst3g05120 973 Gene3D Transferase(Phosphotransferase) domain 1 741 971 - -
Spst3g05120 973 Pfam Leucine rich repeat N-terminal domain 34 70 IPR013210 -
Spst3g05120 973 SUPERFAMILY L domain-like 41 260 - -
Spst3g05120 973 SMART serkin_6 665 955 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst3g05120 973 SMART LRR_typ_2 422 444 IPR003591 -
Spst3g05120 973 SMART LRR_typ_2 445 470 IPR003591 -
Spst3g05120 973 SMART LRR_typ_2 195 219 IPR003591 -
Spst3g05120 973 SMART LRR_typ_2 397 421 IPR003591 -
Spst3g05120 973 SMART LRR_typ_2 145 169 IPR003591 -
Spst3g05120 973 SMART LRR_typ_2 325 349 IPR003591 -
Spst3g05120 973 SMART LRR_typ_2 373 396 IPR003591 -
Spst3g05120 973 SMART LRR_typ_2 121 144 IPR003591 -
Spst3g05120 973 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 270 366 - -
Spst3g05120 973 Pfam Protein kinase domain 667 950 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst3g05120 973 ProSiteProfiles Leucine-rich repeat profile. 147 169 IPR001611 GO:0005515
Spst3g05120 973 Pfam Leucine Rich Repeat 423 441 IPR001611 GO:0005515
Spst3g05120 973 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 374 593 - -
Spst3g05120 973 ProSitePatterns Serine/Threonine protein kinases active-site signature. 783 795 IPR008271 GO:0004672|GO:0006468
Spst3g05120 973 Gene3D Ribonuclease Inhibitor 263 596 IPR032675 -
Spst3g05120 973 Gene3D Phosphorylase Kinase; domain 1 644 739 - -
Spst3g05120 973 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 70 267 - -
Spst3g05120 973 ProSitePatterns Protein kinases ATP-binding region signature. 671 693 IPR017441 GO:0005524
Spst3g05120 973 CDD STKc_IRAK 671 955 - -
Spst3g05120 973 SUPERFAMILY Protein kinase-like (PK-like) 646 952 IPR011009 -
Spst3g05120 973 SUPERFAMILY L domain-like 272 573 - -
Spst3g05120 973 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 741 965 - -
Spst3g05120 973 PANTHER RECEPTOR-LIKE PROTEIN 55 315 955 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g05120 Spst-Chr3 102877578 102881084 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst3g05120 34 971 Receptor kinase-like Gene Family AT5G20480 33.204 8.85e-160 495
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Spst3g05120 Pkinase 6.6e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g05120 - - gmx:100792446 1664.82