Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g05111 ATGCAGCAGAGTGATCAGACGGTGTTGAGCTTGAGGCCCGGTGGTGGAAAAGGCAGCAGGCTCCTCGGTCCTCGATTTGACTCCTCCTCGTCTTCTGCTTCCCCTGCTTTTGGCTCCTTTTCCGCCGATCTTCCTCTTTTGCGGCCCCATGGCGCCGCTCCCTCTCCCTTCTCTATCAAGGCTGGTGATTCACGGTTTGAGGGTCGTGAGCGTGTGCGATATACCAGGGAGCAGCTTTTACAGCTCAGTGAGGGTGTTGAGATCCTTGATGATGTTTTGAAGATCAAACAAGACATTGAAGCTGAACTTTTTGGTGAAGATCAAAGTTGGGCCCGCCCAGAAAACAATCCCTCACATCAATTTCAAAATCGATATTCTGAGCCAGATAATCGGGACTGGCGTGGACGATCTGGCCAACTTTCTGGTAATGCGGATGAGAGGTCTTGGGATAATCTCAAGGAGAGTAGGGAGTTTGGAAATAATCGTCCAGAGCAACTGAATTCTCAGTTTTCAAAGGCACAAATATCTTCTAACCAAGGGGGGGGACCTACTCCTACACTAGTCAAGGCTGAGGTGCCATGGTCAGCTAGAAGGGGAACTCTCTCTGATAAGGATCGTGTCTTAAAGACAGTTAAAGGAATACTAAATAAGTTGACTCCTGAGAAATTTGATCTCTTGAAGGGTCAGTTGATCGATTCTGGCATTACATCTGCCGACATATTGAAGGGGGTTATTTCACTGATATTTGATAAGGCAGTGCTAGAACCAACATTTTGCCCAATGTATGCCCAGCTGTGTTCTGATCTTAATGAAAAACTGCCTCCATTCCCATCTGATGAGCCGGGAGGGAAAGAAATCACTTTTAAGAGAGTACTCTTGAATATATGCCAGGAGGCTTTTGAAGGTGCAGATAAACTGAGAGAAGAAGTGAGACAGATGATTGCTCCCGACCAGGAGATGGAGAGACGGGACAAGGATAGACTTGTCAAGATTCGAACCCTTGGAAACATTCGATTAATTGGTGAGCTGTTGAAGCAAAAAATGGTTCCTGAAAAGATTGTTCATCACATTGTTCAGGAACTTTTAGGACCTCCTGACAGCAAGATCTGTCCAGCTGAGGAAAATGTGGAAGCCATATGCCAATTTTTCAACACTATTGGTAAGCAGCTTGATGAAAGCCCAAAATCACGGCGTATTAATGATATATACTTTAGTCGGTTGAAAGAATTGAGCACCAATCCCCAACTTGCTCCGCGACTGCGATTTATGGTTCGCGATGTTCTAGAGTTGCGTTCTAATAACTGGATTCCAAGGCGTGAAGAGGTGAAAGCTAAAACCATCACTGAAATTCACTCAGAGGCAGAAAAAAATCTTGGATTACGTCCAGGTGCCACTGCAAGTATGAGAAGTAGCCGCGTAGTTTCTGTATCTCCTGGAAATGCAAGTCCGGGAGGATTCCCAATTGCCCGTCCTGGTACAGGTGGAATGATGCCTGGGATGCCAGGGGCGAGGAGGGTGCCAGTGATGCCTGGAATTGATAATGACAACTGGGAGGTGCCTAGGACAAGATCAATGCCGAGAGGAGACATGTCAGGCATACAAACTGGAGGACGTGGTCAGTCTCCTTTCATTTCTAAGCCATCAACTGTCAACTCAAAGTTATTACCTCAAGGTAGTGGTGGTACCATAAGTGGGAGAAGCAGTGCCCTGGTTCATGGAGGTGGTGGTGCTCCTTCTGCTCGTCCCCAAAACATTAGTGTTGAACCCCCAACTCAAATCCCTTCACATGTTAAAGCTGTTTCTGCCGCACCCTCTGAGAAGCCCCAAGCTCCAGCTTCAACATTGAATGTTGAAGAACTTCAGCAGAAAACTGTTTCTCTTCTTGAAGAATATTTTGGTGTTCGGCTTTTGGATGAGGCACTGCAGTGTGTGGAGGAACTAAAAGCTCCATTTTATTACCCTGAGGTTGTGAAGGAAGCCATTTCCCTTGCACTAGATAAAAGTCCGCCATGTGTTGAACCTGTAGGCAAACTTCTTGAGTATCTGTTTGCTAAAAAGATTCTTTCAGCCACAGACATAGGGACTGGGTGCATGTTATTTGCTTCTTTGCTGGATGATATCGGCATAGATTTACCTAAAGCACCTAATAATTTTGGTGAGATAATAGGGAAACTAGTTTTGGTTCAGGCTTTGGATTTTAAGGTGGTGAAAGAAATCCTTAAGAAGGTGGAGGATGACCGGTTTCAGAAAACAATATTTTCCTCTGCGTTGCAGGTAATTAGCTCTGCATCCGGCCAAGCCCTGTTGGATTCACAAGCATCTGATATTGAGGCCTGTCAGAGCCTGTTCAACTGA 2355 0.4582 MQQSDQTVLSLRPGGGKGSRLLGPRFDSSSSSASPAFGSFSADLPLLRPHGAAPSPFSIKAGDSRFEGRERVRYTREQLLQLSEGVEILDDVLKIKQDIEAELFGEDQSWARPENNPSHQFQNRYSEPDNRDWRGRSGQLSGNADERSWDNLKESREFGNNRPEQLNSQFSKAQISSNQGGGPTPTLVKAEVPWSARRGTLSDKDRVLKTVKGILNKLTPEKFDLLKGQLIDSGITSADILKGVISLIFDKAVLEPTFCPMYAQLCSDLNEKLPPFPSDEPGGKEITFKRVLLNICQEAFEGADKLREEVRQMIAPDQEMERRDKDRLVKIRTLGNIRLIGELLKQKMVPEKIVHHIVQELLGPPDSKICPAEENVEAICQFFNTIGKQLDESPKSRRINDIYFSRLKELSTNPQLAPRLRFMVRDVLELRSNNWIPRREEVKAKTITEIHSEAEKNLGLRPGATASMRSSRVVSVSPGNASPGGFPIARPGTGGMMPGMPGARRVPVMPGIDNDNWEVPRTRSMPRGDMSGIQTGGRGQSPFISKPSTVNSKLLPQGSGGTISGRSSALVHGGGGAPSARPQNISVEPPTQIPSHVKAVSAAPSEKPQAPASTLNVEELQQKTVSLLEEYFGVRLLDEALQCVEELKAPFYYPEVVKEAISLALDKSPPCVEPVGKLLEYLFAKKILSATDIGTGCMLFASLLDDIGIDLPKAPNNFGEIIGKLVLVQALDFKVVKEILKKVEDDRFQKTIFSSALQVISSASGQALLDSQASDIEACQSLFN 784
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g05111 784 MobiDBLite consensus disorder prediction 534 566 - -
Spst3g05111 784 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4 GAMMA 59 768 IPR045208 GO:0003743
Spst3g05111 784 SUPERFAMILY ARM repeat 202 436 IPR016024 -
Spst3g05111 784 Gene3D - 200 435 - -
Spst3g05111 784 Pfam MA3 domain 621 731 IPR003891 -
Spst3g05111 784 Pfam MIF4G domain 208 434 IPR003890 GO:0003723|GO:0005515
Spst3g05111 784 SMART if4_15 208 434 IPR003890 GO:0003723|GO:0005515
Spst3g05111 784 SUPERFAMILY ARM repeat 614 771 IPR016024 -
Spst3g05111 784 ProSiteProfiles MI domain profile. 619 741 IPR003891 -
Spst3g05111 784 SMART ma3_7 620 732 IPR003891 -
Spst3g05111 784 MobiDBLite consensus disorder prediction 107 148 - -
Spst3g05111 784 MobiDBLite consensus disorder prediction 517 589 - -
Spst3g05111 784 MobiDBLite consensus disorder prediction 1 45 - -
Spst3g05111 784 FunFam Eukaryotic translation initiation factor isoform 4G-2 199 435 - -
Spst3g05111 784 FunFam Eukaryotic translation initiation factor isoform 4G-2 613 774 - -
Spst3g05111 784 MobiDBLite consensus disorder prediction 24 38 - -
Spst3g05111 784 Gene3D - 613 778 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g05111 Spst-Chr3 102817468 102822794 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst3g05111 1 782 Eukaryotic Initiation Factors Gene Family AT5G57870 65.322 0.0 980
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g05111 K03260 - gmx:100781275 1368.99
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst3g05111 3 102817468 102822794 Spst3g05111 3 102817468 102822794 ECH