Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g05108 ATGCCGACACGTTGTGAAATATGCTGCGAGATTTTGATCGCGATCTTGATTCCTCCACTCGGAGTTTGCTTTCGCCACGGTTGTTGCACAGTTGAATTCCTCATCTGCTTGCTCCTCACAATTCTGGGTTATATTCCTGGCATCATTTATGCTCTCTATGCCATTATTTTTGTTGATCGTGATCAGTACTTTGATGAATACAGGCGTCCTCTCTATGCCCAATACTGA 228 0.4386 MPTRCEICCEILIAILIPPLGVCFRHGCCTVEFLICLLLTILGYIPGIIYALYAIIFVDRDQYFDEYRRPLYAQY 75
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g05108 75 PANTHER HYDROPHOBIC PROTEIN RCI2 LOW TEMPERATURE AND SALT RESPONSIVE PROTEIN LTI6 -RELATED 4 59 IPR000612 GO:0016020
Spst3g05108 75 Pfam Proteolipid membrane potential modulator 8 55 IPR000612 GO:0016020
Spst3g05108 75 ProSitePatterns Uncharacterized protein family UPF0057 signature. 12 27 IPR000612 GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g05108 Spst-Chr3 102799023 102799321 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst3g05108 1 74 RCI2 Gene Family AT4G28088 81.333 1.11e-40 126
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g05108 - - gmx:100306426 139.043