Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g05103 ATGCTTGACTGTGGTCACAAGTCAGAATACATGGGTGGCCAGCGAGAAAATTTTTTGAGGTTGGAAGCTTTGGATTCTACACTATCTTCATCTTCTGATGCGGGAGTTATAAAATCTGGATTTAGTATTGATAAATTAAGTCATAGTGGTCATGGAAGCAGCACAACTTCTAGGTCTTTTAAAAGGGGAATGAGAAGGGGATCTGAGGGGCTGAAATCAATTGGACGAACACTTGGGTTGGGAGTATCTAGGGCAGTGTTCCCGGAAGATCTTAAAGTGTCAGAAAAGAAGATATTTGATCCTCAAGACAAATTCCTGCTCTTATGGAATAAACTTTTTGTTATCTCATGCATTTTGGCTGTGTCTATAGATCCACTGTTTTTTTATCTTCCAGTCATTAATAATTCATTTCATTGTCTTGGCATAGACCGAAAGTTGGCAACAATAGTTACAACACTAAGGACAGTGATTGATGCTTTCTATCTTATACACATGGCTCTCCAATTTCGTACTGCTTATATTGCTCCATCTTCACGTGTCTTTGGGCGCGGTGAGCTTGTGATAGATTCTGCACAGATAGCCAAACGATACTTGCAGCGGTATTTCATCATTGATTTCCTATCAGTGTTGCCAATACCACAGATTGTGGTTTGGAGATTTCTTTTGAGGTCAAAAGGTTCAGATGTACTAGCAACAAAGCAGGCCTTGTTATTCATTATCTTGTTTCAGTATGTTCCTAGATTTCTCCGAATGGTACCATTGACGTCAGAGCTTAAGAGAACAGCCGGTGTCTTTGCTGAAACTGCATGGGCAGGTGCTGCATATTATTTGCTGCTATACATGCTTGCCAGTCATATAGTTGGTGCATTTTGGTATTTGCTAGCTATTGAACGCAATGACTCATGCTGGCAGAAAGCATGCAGTGGCATTGAGAATGTGTGCAATAAAAACTTCCTTTATTGTGGGAACCAGCACATGGAAGGTTATAGTGCTTGGCGTGATAGAAGTGAAGATATTCTTACGTCAAATTGCTCTGCAGATGGTGATCCTCCACCTTTTGATTATGGAATTTTTGAGCAAGTCTTGTCTTCTGGCATAATTTCATCTAAGAAATTCATCTCCAAATACTGTTACTGTTTGTGGTGGGGGCTCCAGAATTTGAGTCTTAGCTACCCTCCTATTAAATGGAGACAAGTTGGAAGGTTATTAAGGGAATTATACTGGTGTGCTGAGGCTGACGAGTGTGAGAAGAGAAGAGGTTTATACCAATCTCAACACAATGCAAGGAACTTGGTAGAAGTTGAGTGCAAAAGGGATAGGAGTACACTTGGCCAGGGGCTTCAGACTAGCACCTACCCTGGAGAGGTTATCTTTTCAATAGCACTTGCTATTTTTGGTCTCATCCTCTTTGCACTTCTGATTGGCAACATGCAGGTATACTTCAAATCGATGAAATTAACCTATCGTGAAAGTAAAATTGCCGGAAGTCTTGTCATTCAGTTTGTTCAGAATTTGCTAGAGTTTCCATGGGCTGTGTTTGATTGGGTCAAAATATACTGGATACTTGAATAG 1572 0.4052 MLDCGHKSEYMGGQRENFLRLEALDSTLSSSSDAGVIKSGFSIDKLSHSGHGSSTTSRSFKRGMRRGSEGLKSIGRTLGLGVSRAVFPEDLKVSEKKIFDPQDKFLLLWNKLFVISCILAVSIDPLFFYLPVINNSFHCLGIDRKLATIVTTLRTVIDAFYLIHMALQFRTAYIAPSSRVFGRGELVIDSAQIAKRYLQRYFIIDFLSVLPIPQIVVWRFLLRSKGSDVLATKQALLFIILFQYVPRFLRMVPLTSELKRTAGVFAETAWAGAAYYLLLYMLASHIVGAFWYLLAIERNDSCWQKACSGIENVCNKNFLYCGNQHMEGYSAWRDRSEDILTSNCSADGDPPPFDYGIFEQVLSSGIISSKKFISKYCYCLWWGLQNLSLSYPPIKWRQVGRLLRELYWCAEADECEKRRGLYQSQHNARNLVEVECKRDRSTLGQGLQTSTYPGEVIFSIALAIFGLILFALLIGNMQVYFKSMKLTYRESKIAGSLVIQFVQNLLEFPWAVFDWVKIYWILE 523
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g05103 523 SUPERFAMILY Voltage-gated potassium channels 100 388 - -
Spst3g05103 523 Gene3D - 111 388 - -
Spst3g05103 523 SUPERFAMILY Voltage-gated potassium channels 441 486 - -
Spst3g05103 523 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 90 487 - -
Spst3g05103 523 Pfam Ion transport protein 108 389 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g05103 Spst-Chr3 102727563 102731981 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst3g05103 5 493 Ion Channels AT2G23980 62.069 0.0 605
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g05103 K05391 - gmx:100784309 718.768