Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g05097 ATGCAGGTCAGAGACACGCACCCAAACACCCCCTCCCCCGCAAACGCTCTCTGTGGCGTTTCTCGAAACCCGAAACGTTTCGCTTTTCCACACAATAAAACCAGCAACCGCTCCAACCCTTCACTCTCTTTCCTCCGCTACTGCGCCATGGCTGAGCGCCGCAGCCCCCAACCTCTCCCAGAGCCACACCCCGAACCAAACGATTCCGACCAAAAACCGCACGACCCCAACCAAACAGAACGACTCAAGGAATCGCCCTCCGCCGCTGAGTCGCAGCGCGGTGAGTTACGCAGCTCCGACGAGCCTTGTAACGAGCCCAATTTAGAAACCCTAGGCTGTGCTGTTTCCTCTTCAGTTCAAACCCTTTCTCTTCAGCACCATCCGAGTGACGATTTGTACGGGAACTCTGCTGCGCCGTATTCGGGTGGAAAAGGTGAAAGTAAGGAGTCAGTTGCACCTCCTGAAAAAGAAATTGTTGAAAGAGGAGCAGCACAGCCACTTCCAGCTCAGATAAATCGGCTTCAGCTGTCCGTCTGTCCAACTCCATTGTCCGTACTACGACCAACTTCTGTTACAGAATCATTATCATCTGTTTCTAGTCCTACTGCACGAAAACAAAAATTATCTACTCCAAAGGTCAATAATGCGCATTTGCCAGAAGTAGATAAGAAAAACCCTTCTGGTGGCAAAACCTTATCTGCTGTTTCTGTTGCAAGGACGTCAGCATCTGATGGATACAACTGGCGGAAGTATGGCCAGAAGCAAGTGAAGAGTCCTACAGGTTCTCGAAGCTATTACAGGTGTACTCATTCAGACTGTTGTGCTAAGAAGATTGAATGCTGTGATCATTCAGGTCATGTCATAGAGATTGTTTATAAAAGTGAGCACACTCATGATCCCCCACGGAAGACTAATTCTCTTAGGGAAAATAAGTTACTGTCTACCAGTGAACCTATTGTAGAAACCAGTGTTCCAGATCAGCCGGTCAGAGTTCTGATGGATCCCGATCCATCCATTTCTACAAAAGAATCTCTACAAGAATCACCCTGCAGCACTGATAAGAAACGACCAAACTCATCTAGTATCGGTGGTAATGGTAAAGTTATTTTAAAAGAGGAACATGTAAATGAGCCAGAGCCCAAAAAAAGAATGAAGAAAGGTGATTTGACAGGCATGGATTCTCCTGTAAAACCTGGAAAGAAGCCCAAGTTTGTCATACATGCAGCAGGGGATGTGGGGATATCTGGTGATGGTTACCGGTGGCGCAAGTATGGACAGAAAATGGTGAAGGGAAATCCGCATCCTAGGAACTACTACAGATGCACTTCTGCTGGATGTCCTGTCAGAAAGCACATTGAGTCTGCCGTGGATAACTCGGATGCCGTCATTATAACGTACAAGGGTGTACATGACCATGACATGCCTGTCCCCAAGAAACGACACGGGCCACCAAGTGCTCCTCTTGTGGCAGCTGCAGCACCTGCCTCCATGAACAGTTTGCAGGTGAAGAAACCCGATTCCCCACAAAACAAGAAAGTTTCTACTCAATGGTCAGTAGATACCGAAGGAGAACTAACTGGGGAAGCCCTGGAGCTTGGGGGTGAGAAAGCAATGGAATCAGCTCGAACGCTTCTGAGCATTGGTTTTGAAATTAAGCCTTGCTGA 1665 0.4793 MQVRDTHPNTPSPANALCGVSRNPKRFAFPHNKTSNRSNPSLSFLRYCAMAERRSPQPLPEPHPEPNDSDQKPHDPNQTERLKESPSAAESQRGELRSSDEPCNEPNLETLGCAVSSSVQTLSLQHHPSDDLYGNSAAPYSGGKGESKESVAPPEKEIVERGAAQPLPAQINRLQLSVCPTPLSVLRPTSVTESLSSVSSPTARKQKLSTPKVNNAHLPEVDKKNPSGGKTLSAVSVARTSASDGYNWRKYGQKQVKSPTGSRSYYRCTHSDCCAKKIECCDHSGHVIEIVYKSEHTHDPPRKTNSLRENKLLSTSEPIVETSVPDQPVRVLMDPDPSISTKESLQESPCSTDKKRPNSSSIGGNGKVILKEEHVNEPEPKKRMKKGDLTGMDSPVKPGKKPKFVIHAAGDVGISGDGYRWRKYGQKMVKGNPHPRNYYRCTSAGCPVRKHIESAVDNSDAVIITYKGVHDHDMPVPKKRHGPPSAPLVAAAAPASMNSLQVKKPDSPQNKKVSTQWSVDTEGELTGEALELGGEKAMESARTLLSIGFEIKPC 554
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g05097 554 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 194 503 IPR044810 GO:0003700
Spst3g05097 554 MobiDBLite consensus disorder prediction 339 365 - -
Spst3g05097 554 MobiDBLite consensus disorder prediction 1 17 - -
Spst3g05097 554 MobiDBLite consensus disorder prediction 190 211 - -
Spst3g05097 554 MobiDBLite consensus disorder prediction 1 22 - -
Spst3g05097 554 MobiDBLite consensus disorder prediction 370 390 - -
Spst3g05097 554 ProSiteProfiles WRKY domain profile. 237 301 IPR003657 GO:0003700|GO:0006355|GO:0043565
Spst3g05097 554 SUPERFAMILY WRKY DNA-binding domain 239 301 IPR036576 GO:0003700|GO:0006355|GO:0043565
Spst3g05097 554 Gene3D WRKY domain 229 302 IPR036576 GO:0003700|GO:0006355|GO:0043565
Spst3g05097 554 Gene3D WRKY domain 401 476 IPR036576 GO:0003700|GO:0006355|GO:0043565
Spst3g05097 554 MobiDBLite consensus disorder prediction 126 155 - -
Spst3g05097 554 MobiDBLite consensus disorder prediction 51 109 - -
Spst3g05097 554 MobiDBLite consensus disorder prediction 65 102 - -
Spst3g05097 554 MobiDBLite consensus disorder prediction 307 322 - -
Spst3g05097 554 FunFam WRKY transcription factor 404 476 - -
Spst3g05097 554 SUPERFAMILY WRKY DNA-binding domain 411 475 IPR036576 GO:0003700|GO:0006355|GO:0043565
Spst3g05097 554 ProSiteProfiles WRKY domain profile. 410 475 IPR003657 GO:0003700|GO:0006355|GO:0043565
Spst3g05097 554 Pfam WRKY DNA -binding domain 244 299 IPR003657 GO:0003700|GO:0006355|GO:0043565
Spst3g05097 554 Pfam WRKY DNA -binding domain 417 472 IPR003657 GO:0003700|GO:0006355|GO:0043565
Spst3g05097 554 SMART WRKY_cls 242 300 IPR003657 GO:0003700|GO:0006355|GO:0043565
Spst3g05097 554 SMART WRKY_cls 415 474 IPR003657 GO:0003700|GO:0006355|GO:0043565
Spst3g05097 554 MobiDBLite consensus disorder prediction 296 402 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g05097 Spst-Chr3 102685171 102689984 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst3g05097 177 554 WRKY Transcription Factor Family AT4G30935 57.180 1.08e-134 398
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Spst3g05097 WRKY 2.6e-23 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g05097 - - gmx:100127377 804.668
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst3g05097 3 102685171 102689984 Spst3g05097 3 102685171 102689984 ECH