Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g05085 ATGAGTGAGAAGGAGAAAGAGAAAGGAATGAGTGAAGGAACGACGTTGCTGCACGGGAAGTACGAACTGGGGAGGGTGTTGGGGCATGGAACTTTTGCGAAAGTGTACCATGCGCGGAACCTGAAGACGGGGCAGCATGTGGCGATGAAGGTGGTGGGGAAGGAGAAGGTGATAAAGGTGGGGATGATGGATCAGGTTAAGAGGGAGATCTCGGTGATGAAGATGGTGAAGCACCCAAACATCGTAGAGCTCCACGAAGTCATGGCCAGCAAGTCCAAGATCTACATCGCCATGGAGTTGGTGCGTGGAGGGGAGCTTTTCAACAAGGTCTCCAAAGGTCGATTGAAGGAGGACGTCGCCAGACTCTACTTCCAGCAGTTGATCTCCGCCGTGGACTTCTGCCATAGCCGCGGCGTCTACCACCGCGACCTCAAGCCGGAGAACCTCCTCCTCGACGAACATGGGAACCTCAAGGTCTCCGACTTTGGACTTACCGCCTTCTCCGACCACCTCAAGGAGGATGGGCTGCTACACACCACGTGCGGCACGCCCGCGTACGTGTCGCCGGAGGTCATAGCGAAAAAGGGGTACGACGGTGCCAAGGCTGATATATGGTCATGTGGGGTCATCCTCTATGTCCTCCTCGCAGGGTTTTTACCCTTTCAGGATGATAATTTGGTTGCCATGTATAAAAAAATTTACCGAGGGGACTTCAAGTGTCCACCTTGGTTTTCTGTGGAGGCGCGAAGGCTTGTTACCAGACTCCTCGACCCGAACCCGAATACCCGGATTAGTATTTGTAAAGTGATGGAGTCTTCTTGGTTTAAAAAGCCGGTGCCGTGGAAGGTGGCGGAGGTGGATTTGGAGGTGGATTTGGAGGAGAAGTGTGAGACGCCTGCTACGATGAACGCGTTTCACATAATCTCGTTGTCGGAGGGGTTCAATTTGTCACCGTTGTTTGAGGAGAAGAAGAGGGAGGAGATGAGGTTCGCGACGGCTGGGACGCCGAGCAGCGTGATATCGCGGCTGGAGGAGGTGGCGAAGGCGGGGAAGTTCGACGTGAAGAGTAGCGAGACCAAGGTGAGGCTTCAGGGACAGGAGCGTGGGAGGAAAGGGAAGTTGGCTATTGCGGCGGATATTTATGCGGTGACGCCGTCGTTTATGGTGGTGGAAGTGAAGAAGGACAATGGGGATACCTTGGAGTACAACCAGTTCTGCAGCAAACAGCTTCGTCCTGCGCTTAAAGACATCTTCTGGAATTCCCCACAGAATTCCACACCAGCCATAGTGCTTGAATAA 1299 0.5366 MSEKEKEKGMSEGTTLLHGKYELGRVLGHGTFAKVYHARNLKTGQHVAMKVVGKEKVIKVGMMDQVKREISVMKMVKHPNIVELHEVMASKSKIYIAMELVRGGELFNKVSKGRLKEDVARLYFQQLISAVDFCHSRGVYHRDLKPENLLLDEHGNLKVSDFGLTAFSDHLKEDGLLHTTCGTPAYVSPEVIAKKGYDGAKADIWSCGVILYVLLAGFLPFQDDNLVAMYKKIYRGDFKCPPWFSVEARRLVTRLLDPNPNTRISICKVMESSWFKKPVPWKVAEVDLEVDLEEKCETPATMNAFHIISLSEGFNLSPLFEEKKREEMRFATAGTPSSVISRLEEVAKAGKFDVKSSETKVRLQGQERGRKGKLAIAADIYAVTPSFMVVEVKKDNGDTLEYNQFCSKQLRPALKDIFWNSPQNSTPAIVLE 432
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g05085 432 ProSiteProfiles Protein kinase domain profile. 21 275 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst3g05085 432 Gene3D Phosphorylase Kinase; domain 1 15 100 - -
Spst3g05085 432 Pfam Protein kinase domain 21 275 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst3g05085 432 CDD STKc_SnRK3 20 274 - -
Spst3g05085 432 ProSiteProfiles NAF domain profile. 297 321 IPR018451 GO:0007165
Spst3g05085 432 SMART serkin_6 21 275 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst3g05085 432 FunFam Non-specific serine/threonine protein kinase 12 100 - -
Spst3g05085 432 SUPERFAMILY Protein kinase-like (PK-like) 18 311 IPR011009 -
Spst3g05085 432 PANTHER CALCIUM/CALMODULIN-DEPENDENT PROTEIN KINASE KINASE-RELATED 12 415 - -
Spst3g05085 432 Pfam NAF domain 299 355 IPR004041 GO:0007165
Spst3g05085 432 FunFam Non-specific serine/threonine protein kinase 11 300 - -
Spst3g05085 432 FunFam Non-specific serine/threonine protein kinase 297 419 - -
Spst3g05085 432 Gene3D Kinase associated domain 1, KA1 296 420 - -
Spst3g05085 432 ProSitePatterns Protein kinases ATP-binding region signature. 27 54 IPR017441 GO:0005524
Spst3g05085 432 Gene3D Transferase(Phosphotransferase) domain 1 101 279 - -
Spst3g05085 432 ProSitePatterns Serine/Threonine protein kinases active-site signature. 139 151 IPR008271 GO:0004672|GO:0006468
Spst3g05085 432 CDD CIPK_C 303 415 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g05085 Spst-Chr3 102546941 102548239 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst3g05085 4 428 CBL-interacting serine-threonine protein kinases AT4G30960 73.016 0.0 630
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Spst3g05085 Pkinase 1.5e-72 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g05085 - K07198 var:108321114 807.749