Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g05065 ATGTTTCAATCCTCAGAAGAAGCTTCTGATTTGTTCAAAATCGGTTACTGGTACAGTGGCAGCGACTTTCCCGTATCTGATATCAACTCTGCATTCTACACTCACCTCGTATGCGCTTTTGCAGAAGTCAACACTTCCACCTTCGAAATCTCCCTCTCCCCAACAAACCACCAACGCTTCTCCACTTTCACGAACACTGTCAAACTCAACAACCCTTCCGTCACCACACTTCTCTCCACTGGCGGAGACCAAAACAGCGACGCCATCCAATCCATGCTCAGCAAAGCCTCCTCAAGGAAACCCTTCATCCAATCTTCCATAACAATGGCCAGGCTTTACGGCTTTCAGGGCCTCGACCTTTCCTGGTCCACCATCAAAACATCCTCCGATGCAGACAACCTGGGACAGCTCTTCCAAGAGTGGCGAGTTGCTGCAGAATCTGATGCCCTAGCTAACTCTTCACTCCCACAATTGATCCTAACTGCTGCAGTTCAAGCTTCACCCGATTTGAATAACGGTTCCTACCCTGTGGACTCAATCAGAAGCAACCTTAATTGGGTACATGTTAACACATACTCTTACCATACACCCAGGACACAAAACTTCACTGCTGCACCTTCAGCTCTATATGATCCTAATGTTAGTTACATCAACACAAACTATTATATCAGGGCATGGATTGAGAAGGGGTTAGATGCTAACAAGTTGATTTTGGGTTTGCCTTTCTTTGGATCTGCATGGAAACTCCAAAATCCAGATAGCAACACAATAGGAGCAGTGGCAACGGCTCCAGCAGATGACACTGACCAGGGATCTATAAGCTACAAGGACATAAAAAATCAAATTCAGCAACATGGGGCTGCAGTAGAGTACAATGATAGTTATGTTACAAATTACTGCACATTTGGGTCCACCTGGATTGGCTATGACGACATTGAAGCTGTTCAGAGGAAGGTGTCCTATGCCCAAGAAATGAGGCTACTTGGTTACTACGTTTGGCAAATTTCCCACGATGACGACAATTGGACACTTAGTCGCGCAGCAGATCAATTTACGTTCTCAGCTGAACACGTTGACGACGACAAAGAGGAACGATGGAAATTGTTAGTGATAATTTTGAGTGTAACTGCTACCGTTATACTCATGTTAGGGACACTACTCAATGCTGCCAAACATTCTTGGACTAAAATCATGAATAATAATAAAGAAGCTGGAGAACCTTTTCGTGGGAATGCTCCAGATTTACATGTCTATAGATTTTCTGACATTAAAGCGGCTACAGACGAATTTGCACTTGAAAATAAGATCGGACAAGGTGGTTATGGTCCTGTTTACAAGGGCATCCTACCTGATGGTCAGGAAATAGCTGTAAAAAAATTATCAAAAGCATCTACACAAGGATTCGAGGAATTCAAAAATGAGGTAACACTAACAGCAAGGCTACAACATGTAAATCTTGTCCGGTTGTTAGGTTTCTGCATTGAACGAGGGGAGCAGATGCTGGTGTACGAGTACATGCCTAACATAAGCTTGGACTTCTACCTTTTTGACGCAGAGATGAAGCCAAAGATTTCAGACTTTGGGATGGCAAGAATATTCACAAAAAATGAACAAGAAGCAAACACTAGCAAGATTGTGGGAACATATGGTTATGTTCCTCCTGAATACGTTAGACAAGGCGTCTACTCCACTAAGTCTGATGTCTATAGTTTTGGAGTTCTACTCCTACAAATTATAAGTGGCAAGAAGACTCATGGTTTTTATGGAGAGAACGAAGATTTAAAGCTCTTGGAGTATGCGTATGAGTTATGGAAAGAAGGGAAGGGTATGGAGTTCATGGATGATTTACTAGATGATACATATTCAGAGTGCAAACTAATGAGATGCATGCAAGTTGGTTTGTTATGCGTCCAAGAACATGCAAGTGATAGGCCTTCCATGGTAGAAGTTTGTTCAATGTTGAGAAACGAAAATAAGTCTCAAAGCATCCCCAAGAGACCAGCATTTTCACAGGTGGAAGACAAGGAAGATGAAAATGAGTGCCAACCCTTAAAAAAATTTTCAGTCGACGATGGAACCATCACTGAAGTGATTCTTAATAGACGTGTGCATAGTGAACTCGTCCACGACAACTGTGTGTAA 2142 0.4272 MFQSSEEASDLFKIGYWYSGSDFPVSDINSAFYTHLVCAFAEVNTSTFEISLSPTNHQRFSTFTNTVKLNNPSVTTLLSTGGDQNSDAIQSMLSKASSRKPFIQSSITMARLYGFQGLDLSWSTIKTSSDADNLGQLFQEWRVAAESDALANSSLPQLILTAAVQASPDLNNGSYPVDSIRSNLNWVHVNTYSYHTPRTQNFTAAPSALYDPNVSYINTNYYIRAWIEKGLDANKLILGLPFFGSAWKLQNPDSNTIGAVATAPADDTDQGSISYKDIKNQIQQHGAAVEYNDSYVTNYCTFGSTWIGYDDIEAVQRKVSYAQEMRLLGYYVWQISHDDDNWTLSRAADQFTFSAEHVDDDKEERWKLLVIILSVTATVILMLGTLLNAAKHSWTKIMNNNKEAGEPFRGNAPDLHVYRFSDIKAATDEFALENKIGQGGYGPVYKGILPDGQEIAVKKLSKASTQGFEEFKNEVTLTARLQHVNLVRLLGFCIERGEQMLVYEYMPNISLDFYLFDAEMKPKISDFGMARIFTKNEQEANTSKIVGTYGYVPPEYVRQGVYSTKSDVYSFGVLLLQIISGKKTHGFYGENEDLKLLEYAYELWKEGKGMEFMDDLLDDTYSECKLMRCMQVGLLCVQEHASDRPSMVEVCSMLRNENKSQSIPKRPAFSQVEDKEDENECQPLKKFSVDDGTITEVILNRRVHSELVHDNCV 713
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g05065 713 Gene3D Glycosidases 25 339 - -
Spst3g05065 713 SMART 2g34 12 338 IPR011583 GO:0008061
Spst3g05065 713 Pfam Protein tyrosine and serine/threonine kinase 517 653 IPR001245 GO:0004672|GO:0006468
Spst3g05065 713 SUPERFAMILY (Trans)glycosidases 12 352 IPR017853 -
Spst3g05065 713 Gene3D - 242 309 IPR029070 -
Spst3g05065 713 SUPERFAMILY Protein kinase-like (PK-like) 414 671 IPR011009 -
Spst3g05065 713 Gene3D Transferase(Phosphotransferase) domain 1 507 679 - -
Spst3g05065 713 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 515 677 - -
Spst3g05065 713 Gene3D Phosphorylase Kinase; domain 1 390 505 - -
Spst3g05065 713 Pfam Protein kinase domain 432 514 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst3g05065 713 SUPERFAMILY Chitinase insertion domain 243 309 IPR029070 -
Spst3g05065 713 FunFam Class V chitinase CHIT5b 242 309 - -
Spst3g05065 713 ProSiteProfiles Glycosyl hydrolases family 18 (GH18) domain profile. 11 355 IPR001223 GO:0005975
Spst3g05065 713 ProSiteProfiles Protein kinase domain profile. 430 669 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst3g05065 713 CDD GH18_plant_chitinase_class_V 13 344 - -
Spst3g05065 713 Pfam Glycosyl hydrolases family 18 14 338 IPR001223 GO:0005975
Spst3g05065 713 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 394 505 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g05065 Spst-Chr3 102359345 102363410 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst3g05065 8 350 Glycoside Hydrolase AT4G19810 43.314 1.07e-89 284
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Spst3g05065 Glyco_hydro_18 1.4e-63 CL0058
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g05065 - - vun:114175226 1113.6