Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g05064 GGCAAATTACGGAAGGGTCAGGAAATAGCTGTAAAAAGACTCTCAGAAACCTCAAATCAAGGCCCTGAAGAGTTCAAGAATGAGATCACGCTTACAGCAAGACTACAACATGTGAATTTAGTTAGACTTCTGGGTTACTGCACAAAAAGGGATGAGAAGATTCTGATCTATGAATACCTGCCAAACAAAAGCTTAGATCATTTCCTCTTTGATCCAACCAAATCAATTCGTTTAGACTGGAACAAGCGTGTCAATATCATTGAAGGCGTTACTCAAGGCCTTCTTTATCTCCAAGAGTACTCAAATTTTACTATAATTCACCGAGATCTTAAAGCTAGTAATGTTTTGCTAGATGACAATATGAATCCGAAGATATCCGATTTTGGTATGGCTAGAATTTTCAGAAAATATGACCTTGAAGCAAACACAGAAAGGATAGTTGGAACATATGGGTATGTACCTCCTGAATACGTGAGAAAAGGAATATACTCAACCAAGTACGATGTTTATAGTTTTGGAGTTCTTCTCTTGCAAATCATAAGCGGAAAGAGGACTTCATGTTATTATGGCATGCATGAAAATATGACCCTTTTGGAATATGCATATGAACTGTGGAGGGAAGGAAGAGGTGCGGAGTTTGTTGACCCTTCATTGGATGATGCAGCCTCACCTTGTAAAATCATGAGATGCATGCATGTAGCTCTGCTGTGCGTTCAAGAGAACTCTGCAGATAGACCTTCCATGTTGGAAGTTGATTCACTGCTGAAGAATGAAGGTGCAGCTGTTGGTACTCCCAAAATGCCTGCATTCTCAGTCCAGAAACGTGGAGATGAGGAAGAAACATCTCACAGCGGGATCAAGTTTTATTCAATCAACGATGTTACAATTTCTCAACTGGCACCAAGATGA 909 0.3993 GKLRKGQEIAVKRLSETSNQGPEEFKNEITLTARLQHVNLVRLLGYCTKRDEKILIYEYLPNKSLDHFLFDPTKSIRLDWNKRVNIIEGVTQGLLYLQEYSNFTIIHRDLKASNVLLDDNMNPKISDFGMARIFRKYDLEANTERIVGTYGYVPPEYVRKGIYSTKYDVYSFGVLLLQIISGKRTSCYYGMHENMTLLEYAYELWREGRGAEFVDPSLDDAASPCKIMRCMHVALLCVQENSADRPSMLEVDSLLKNEGAAVGTPKMPAFSVQKRGDEEETSHSGIKFYSINDVTISQLAPR 302
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g05064 302 PIRSF ILK 3 259 - -
Spst3g05064 302 FunFam Uncharacterized protein 1 59 - -
Spst3g05064 302 Pfam Protein tyrosine and serine/threonine kinase 5 252 IPR001245 GO:0004672|GO:0006468
Spst3g05064 302 ProSitePatterns Serine/Threonine protein kinases active-site signature. 105 117 IPR008271 GO:0004672|GO:0006468
Spst3g05064 302 SMART serkin_6 1 255 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst3g05064 302 ProSiteProfiles Protein kinase domain profile. 1 255 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst3g05064 302 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 1 300 - -
Spst3g05064 302 SUPERFAMILY Protein kinase-like (PK-like) 4 274 IPR011009 -
Spst3g05064 302 Gene3D Transferase(Phosphotransferase) domain 1 60 263 - -
Spst3g05064 302 Gene3D Phosphorylase Kinase; domain 1 1 59 - -
Spst3g05064 302 FunFam Uncharacterized protein 60 264 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g05064 Spst-Chr3 102353580 102354832 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst3g05064 1 302 Receptor kinase-like Gene Family AT4G11530 51.282 5.92e-110 332
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Spst3g05064 PK_Tyr_Ser-Thr 6.4e-40 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g05064 - - aprc:113847882 547.74