Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g05043 ATGGCGTTTGATCAGAATTCTGTTCCGTTGGATCTTCGTCCTTTGAACGTAGCCGCGGCATTGGCGGAGGAGCCGATGATTTCGCCGGCCACCGTCACGCCGCCGACTCCGAATTCTGTCGGCGAGCTTTTTTACCAGCCGGCGGCATCCGCCGCAGGCACAACGTGGTGCGTGCGGCCCATTGCGCATGCCAATGTGAGCCCTGCCGCGCCGTATGGGTTTAACTACGGCGCTTCCAGCTTTGGCAATCGTGTTTTGAATTTGGGGAAGGTTGTGGGATGTAATGGACTGGAAAAGGTCTGCAATGATGCGAGTGGTTTTGGTTATGGTGTTGGTGGGGTTCGGGGCAACAGAGTGGCCGGGAATGGCAGCGATCACGGTGGCGGGGATGAGGGTGGTGGCGGTGATGATTCGGCGTCCGGGAGGAAGGTGAAGTTTCTGTGCAGTTTTTCTGGGAAGATTTTGCCTAGGCCTAGTGATGGAATGTTGAGATATGTTGGGGGGCAAACAAGGATCATTAGTGTTAGGAAGGATGTGAGTTTCAATGATTTGGTGCAGAAGATGACAGACACTTATGGGCAGGCTGTGGTTATCAAGTACCAGCTTCCTGAGGAGGATCTTGATGCCTTGGTGTCCGTGTCGTGTCACGATGATGTTGAGAATATGATGGAGGAGTATGACAAGTTGGTTGAGAGATCTCCTGATGGTTCTGCAAAACTAAGAGTTTTTCTGTTTTCTGGTTCGGAGATGGAAGTTTCTACTGGGGTGCTGTCTGGGGACTTACAGGATACCGGGCAGAAATACTTTGATGCTGTGAATGGTATTGGTATGACAGAGGCTATTGGGTTTGGTGTAGGGATCAATAGGAAGGGAAGTGTTACAAGTGCTGCTTCAACCCAGAATTCGGATTTGAGTGGGGCTGAGACTTTTGATAGTTCAATTACTGGTCAAGGGGATGCCAATGGGGTCCCCTTGTCATCATCTAAGGAGAATGTCTCAACTGCTAATATGGTGATTTCAGAGGCCAGTACACCGGTTTGCACGGGTGTTTGTGCAATTTCCATGCCCATGCCTGTGGCTAAGGCTAGTCCAACCCCATCCCACAGTCCTTATTTTCAAAATGACGTTGAGTTAGAGAGGTCTGTGCCTGTTACTTTGTCGACACAGCCTTTTGGATTGCCGCAAGCTGGAACAGAAGTTCCAACCCCTTCACCTTATTTGCAGCCTTTTGTTGATCCTAGCCCGGAGGTTATGAACCCTCCAGACTATCTCCAGCTTTCTTCACAGATGGGGTTCACAAACCCTCCGCTTGTAGGAAAGACTGCGCCTGTGTTCAGGCAACAGCAGTTTCACGATAATACTCCTGGCTCAGCATTCCATCATCAGGTCATCCCTGGGGTACAAATGACTGTGTCTCCACAATCTACTCTTGCTGGTGTGAGATCGAATGTTATTCAACAACAACCGTTGATGCAACCACAGCAACATCTTTTGGATCAATACCATGATGAAAATACATCAGGGGTAAGGATTATTCAGCTTCCTCCTGAACGTAACTACAACGCTTACCAGGTTCCAGTGAGTCAAGTCCCACCTGTCATAGTTGGAGGAAATTATGGCTGGGTTCAGGTTCCTTCACAAGAGCGCGTTGTTATCTCTGATGGAGTATTACCTCAACAACAGGTAATGAGCCCTGCTGAGAAATTCCGAAGAGTTGAGGACTGTTCTATGTGTCAGACAAAACTACCTCATGCACATTCAGATCCAGTAGTTCAGGATCAGCGTAGTAGTGCAGGTCCTGTCCCTGATTCAATTCCAAGTCACTATAGTTTCCCAATGGAGGACAACATAAAAGCTCAAGCACCACATAAGGTTATGATGGCACCGTTGATGGAAGGCATTGCTGAGCAAGGGACTGGGACCAGACCCAGGGTCGTTGGCAAACTGGAAACTCCTGATGGAGTGCGTCAGACTGAGACCACTGGGCTTTCTCACAATATTGAGCCGCATCCAGAAGAATTTGATCATCCCGGGAGTTCATTTTTCAAGGAAAAGGTTGCATTGAAATGTAGAAAACAATTTTCAAATGATGAGCTCATGGGAACAGCACCACTCTCTTATCTAGATGATGTTGGCGACCAGCACATGGCACCAGTTGAAAATTGGGTTAAACAAGATGTGCTTAATAACAAACCTATCAACAATGATATGTCTACAGTTGATGGAACATCCATACGAACTTCAGAGTGTATGGTTCAACGATCTCCAAATGAATATACCAATGAGCACACTGGGGTTGTTTCTAAATCAGACGCCATAGATAATTGGATTAGACAAGACCATCTAAAACCTATTGATGGAAGGATGGACACCTTCAAGATACACAATTCTGATGTTTATGGAAGTAATGATTACTCCTTTCTGCCAGTTGATAAACCCAGTGGGAATGATACTTTAGGTTACAACACTCGGCAATCTGCAGAGGAAGAGGTGATTCTGGATAACAACTTTGGCAGGTCAAAGTTGATAGTTGATGCTAATCAAAATAAGATGGCAGGTGTGATGCCTTGTTCCTCTGTGGAAATTTCATACAGGAAAAATTCCAGGTCAGGGGAATACAATGAGGCTACACAACCCCCTGTTTGGGGCATTCCTAGCTCAAATTCTCAATCGAATACTGGAAACCCCCACATTGATGATGCAACACTATCTTCATCATCCCCATCTGTCAGGTTTGGAGATGTGCAGGATACTCCAAACTCACTTTTCAGCAATCAGGATCCCTGGAATATACAGCATGGTACTTTCTTTCCACCTGCTAGACCAAGCAAAGCTGCATTGAAGAAAGAAACTTATTCTTGTGAGGATCCCTTTGGTGAAAATCCTGGAAACTTTGGGGAACAAAGTTTAGAATCACAGTTGGATGATAGCCTCTATCAGTCATTCAAACAAAATTTAACATTCGATCATGGTCGGTCTGCAAAAGGTTCAGCAGAAGACCAACAACTCCAAGCTGTCGCGGAAAATGTAGCAGCTTCTGTTTTGCACTCAAGAACTCCTTCAAATTCTGACTTGCATTCCAGAGACGTTTCCTGCTGTGATAATATTGAGGATGGAAGTGTTCAAAATAATCTAATAGATGTAAATTGTGGACATAAAACTCAGGATGTTAGGAACAAGCAACTGGGAAAGACAAATTTTGACATTCCAGCATCAGGTTTTGGAAAATTACAGGTTATAAAGAACCGTGATCTTGAAGAACAGACAGAACTGGGTTCTGGCACATTTGGGACTGTATATCATGGAAAATGGAGGGGCACTGATGTTGCTATCAAGCGAATTACTGATAGGTGTTTTGCTGGCAAGCCTTCAGAGCAAGAGCGCATGAGATATGACTTCTGGAATGAGGCAATCAAGCTTGCTGACTTGCACCATCCAAATGTGGTAGCTTTTTACGGTGTTGTGATTGATGGTCCAGGGGGTTCTGTGGCAACAGTTACTGAATATATGGTTAATGGTTCCTTAAGAAATGCCTTGCAGAAGAGTGAGAGGAACCTTGACAAGCGCAAGCGACTTTTGATTGCAATGGACGTGGCCTTTGGCATGGAGTACCTACATGGGAAAAACATTGTACACTTTGACTTGAAAAGTGACAACTTGCTAGTTAATCTCCGAGATCCACACCGCCCAATATGCAAGGTTGGTGACTTGGGTCTGTCCAAAGTAAAATGCCAGACACTGATCTCTGGTGGGGTGAGAGGAACTCTGCCGTGGATGGCTCCAGAACTGCTTAACGGAAGCAGTAGCCTTGTTTCAGAGAAGGTTGACGTATTTTCATATGGCATTGTGATGTGGGAACTCTTGACTGGAGATGAGCCATACGCTGACTTGCACTATGGTGCTATTATAGGTGGTATCGTGAGCAACACTCTGCGCCCTCCTGTTCCAGAATCGTGTGATCCAGAATGGACACTGTTGATGGAGAGGTGCTGGTCATCAGAGCCATCAGAGAGACCAACCTTCACTGAGATTGCCAATGAATTGCGTTCTATAGCGGCCAAGATCTCTCCCAAAGCACAAAACTCTCCCAAAGGACAAAACCAACAGCTGCAACCCTCTCCATTGCTCACTCAACTCCACAAATGA 4146 0.46 MAFDQNSVPLDLRPLNVAAALAEEPMISPATVTPPTPNSVGELFYQPAASAAGTTWCVRPIAHANVSPAAPYGFNYGASSFGNRVLNLGKVVGCNGLEKVCNDASGFGYGVGGVRGNRVAGNGSDHGGGDEGGGGDDSASGRKVKFLCSFSGKILPRPSDGMLRYVGGQTRIISVRKDVSFNDLVQKMTDTYGQAVVIKYQLPEEDLDALVSVSCHDDVENMMEEYDKLVERSPDGSAKLRVFLFSGSEMEVSTGVLSGDLQDTGQKYFDAVNGIGMTEAIGFGVGINRKGSVTSAASTQNSDLSGAETFDSSITGQGDANGVPLSSSKENVSTANMVISEASTPVCTGVCAISMPMPVAKASPTPSHSPYFQNDVELERSVPVTLSTQPFGLPQAGTEVPTPSPYLQPFVDPSPEVMNPPDYLQLSSQMGFTNPPLVGKTAPVFRQQQFHDNTPGSAFHHQVIPGVQMTVSPQSTLAGVRSNVIQQQPLMQPQQHLLDQYHDENTSGVRIIQLPPERNYNAYQVPVSQVPPVIVGGNYGWVQVPSQERVVISDGVLPQQQVMSPAEKFRRVEDCSMCQTKLPHAHSDPVVQDQRSSAGPVPDSIPSHYSFPMEDNIKAQAPHKVMMAPLMEGIAEQGTGTRPRVVGKLETPDGVRQTETTGLSHNIEPHPEEFDHPGSSFFKEKVALKCRKQFSNDELMGTAPLSYLDDVGDQHMAPVENWVKQDVLNNKPINNDMSTVDGTSIRTSECMVQRSPNEYTNEHTGVVSKSDAIDNWIRQDHLKPIDGRMDTFKIHNSDVYGSNDYSFLPVDKPSGNDTLGYNTRQSAEEEVILDNNFGRSKLIVDANQNKMAGVMPCSSVEISYRKNSRSGEYNEATQPPVWGIPSSNSQSNTGNPHIDDATLSSSSPSVRFGDVQDTPNSLFSNQDPWNIQHGTFFPPARPSKAALKKETYSCEDPFGENPGNFGEQSLESQLDDSLYQSFKQNLTFDHGRSAKGSAEDQQLQAVAENVAASVLHSRTPSNSDLHSRDVSCCDNIEDGSVQNNLIDVNCGHKTQDVRNKQLGKTNFDIPASGFGKLQVIKNRDLEEQTELGSGTFGTVYHGKWRGTDVAIKRITDRCFAGKPSEQERMRYDFWNEAIKLADLHHPNVVAFYGVVIDGPGGSVATVTEYMVNGSLRNALQKSERNLDKRKRLLIAMDVAFGMEYLHGKNIVHFDLKSDNLLVNLRDPHRPICKVGDLGLSKVKCQTLISGGVRGTLPWMAPELLNGSSSLVSEKVDVFSYGIVMWELLTGDEPYADLHYGAIIGGIVSNTLRPPVPESCDPEWTLLMERCWSSEPSERPTFTEIANELRSIAAKISPKAQNSPKGQNQQLQPSPLLTQLHK 1381
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g05043 1381 SMART PB1_new 158 247 IPR000270 GO:0005515
Spst3g05043 1381 MobiDBLite consensus disorder prediction 866 918 - -
Spst3g05043 1381 CDD STKc_MAP3K-like 1091 1348 - -
Spst3g05043 1381 FunFam Octicosapeptide/phox/Bem1p domain kinase superfamily protein 1078 1172 - -
Spst3g05043 1381 FunFam Octicosapeptide/phox/Bem1p domain kinase superfamily protein 1173 1364 - -
Spst3g05043 1381 Gene3D Phosphorylase Kinase; domain 1 1078 1172 - -
Spst3g05043 1381 ProSitePatterns Protein kinases ATP-binding region signature. 1091 1122 IPR017441 GO:0005524
Spst3g05043 1381 Pfam Protein tyrosine and serine/threonine kinase 1086 1348 IPR001245 GO:0004672|GO:0006468
Spst3g05043 1381 MobiDBLite consensus disorder prediction 119 139 - -
Spst3g05043 1381 SUPERFAMILY Protein kinase-like (PK-like) 1078 1347 IPR011009 -
Spst3g05043 1381 PRINTS Tyrosine kinase catalytic domain signature 1319 1341 IPR001245 GO:0004672|GO:0006468
Spst3g05043 1381 PRINTS Tyrosine kinase catalytic domain signature 1275 1297 IPR001245 GO:0004672|GO:0006468
Spst3g05043 1381 PRINTS Tyrosine kinase catalytic domain signature 1167 1180 IPR001245 GO:0004672|GO:0006468
Spst3g05043 1381 PRINTS Tyrosine kinase catalytic domain signature 1204 1222 IPR001245 GO:0004672|GO:0006468
Spst3g05043 1381 MobiDBLite consensus disorder prediction 297 328 - -
Spst3g05043 1381 CDD PB1_UP2 147 245 - -
Spst3g05043 1381 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1210 1222 IPR008271 GO:0004672|GO:0006468
Spst3g05043 1381 Gene3D Transferase(Phosphotransferase) domain 1 1173 1381 - -
Spst3g05043 1381 ProSiteProfiles Protein kinase domain profile. 1085 1351 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst3g05043 1381 MobiDBLite consensus disorder prediction 1355 1381 - -
Spst3g05043 1381 PANTHER SERINE-THREONINE PROTEIN KINASE 210 1352 - -
Spst3g05043 1381 Pfam PB1 domain 163 246 IPR000270 GO:0005515
Spst3g05043 1381 MobiDBLite consensus disorder prediction 655 678 - -
Spst3g05043 1381 FunFam Octicosapeptide/phox/Bem1p domain kinase superfamily protein 163 247 - -
Spst3g05043 1381 SUPERFAMILY CAD & PB1 domains 159 250 - -
Spst3g05043 1381 Gene3D - 164 246 - -
Spst3g05043 1381 SMART serkin_6 1085 1351 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g05043 Spst-Chr3 102213376 102219935 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst3g05043 64 593 MAP Kinase Kinase Kinase AT3G46920 39.700 1.16e-82 294
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-6 Spst3g05043 PK_Tyr_Ser-Thr 1.2e-59 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g05043 - - gmx:100819234 1959.5