Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g05030 ATGGGATTTCATCGTACATGTCTTGTTTCAGATTTTAGCTGGCTCAGTTTAGGCGATGCTGCCATCTCTGTAATGCCATATGCACAGCACATAGCACTAGGAACCAATTTTTGCACTGAGTGGCTGAATAATTTGGGATACCAAAAGCCTGCATGGTTGGAAGCTCTTTACACACAAAAGTTCTTTGTTGGATGCTCTTACCATGAGAATGCTAAAAAGAATGAGAAGAATGTCTGCTGCTTAGATTGTTGCACCAGTATTTGCCCTCACTGCTTGCCATCTCATCGCTTCCACAGGCTTCTTCAGGTTCGCCGCTACGTTTATCATGATGTTGTTAGGCTGGAAGATCTTCAGAAACTCATAGACTGCTCCAACGTTCAGGCCTATACTATCAATAGTGCCAAGGTGGTGTTCATCAAGAAGAGACCTCAAAATCGGCAATTCAAAGGGTCAGGAAACTACTGCACCTCCTGTGATAGAAGTCTCCAAGAGCCTTTTATCCATTGCTCTCTTGGATGCAAGGTTGATTTTGTGCTGAAACACTACAAGGATCTCTCTCCATACTTGAGGACATGTAACTCTCTACAACTAAGTCCTGACTTTCTGATCCCACAAGAGATGGGGGATGAGGAGATGACTCGTTCAACGGTTGTGGATTGTGATGAACCAATGAGCTCATGCTCGGGGTCATCAGGGTCAGAGAACAACATGAGCATGTCTTGCACAGAGATTGTTAGGAAGAGGAGGAGTGGATGGAGCACTGTGTGTGCAAAATTCATGGCCAATAGCAGTAATAAGGTTTCGGATGAAGACATGGCCACCAGCATGAGTAGAAGAAAAGGGATCCCTCATAGATCTCCACTGTGTTAG 870 0.4471 MGFHRTCLVSDFSWLSLGDAAISVMPYAQHIALGTNFCTEWLNNLGYQKPAWLEALYTQKFFVGCSYHENAKKNEKNVCCLDCCTSICPHCLPSHRFHRLLQVRRYVYHDVVRLEDLQKLIDCSNVQAYTINSAKVVFIKKRPQNRQFKGSGNYCTSCDRSLQEPFIHCSLGCKVDFVLKHYKDLSPYLRTCNSLQLSPDFLIPQEMGDEEMTRSTVVDCDEPMSSCSGSSGSENNMSMSCTEIVRKRRSGWSTVCAKFMANSSNKVSDEDMATSMSRRKGIPHRSPLC 289
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g05030 289 PANTHER PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN 48 288 - -
Spst3g05030 289 Pfam PLATZ transcription factor 104 175 IPR006734 -
Spst3g05030 289 MobiDBLite consensus disorder prediction 267 289 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g05030 Spst-Chr3 102103083 102106736 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF PLATZ Spst3g05030 PLATZ 5.4e-26 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g05030 - - gmx:100785737 490.73
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst3g05030 3 102103083 102106736 Spst3g05030 3 102103083 102106736 ECH