Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g05025 ATGTTGCGAGTGAAGGAAGGGAAAAGGCCACCTTGGGTGGGACTTGGAGCTGCCGTGTGGGTTCAGATTTGTTCAGGAAATGGCTACACTTTCCCTCTCTACTCTCACTCCTTGAAATCCGTTTTGGGTTTCAACCAGAGCCAAATAACTCTGCTTGGTGTTGCCAATGATATTGGTGAGAATGTTGGCATTCTTCCTGGTCTCGCCTGCAACAAGTTCCCTCCTTGGCTCATTCTTTTTATTGGTGGTCTCTTATCATTACTTGGTTTTGGTGTTCTCTGGCTTGGTATTACTAAAACACTTGATTCCGTTCCTTTCATCTTGCTATGGCTTGCACTTGCTGTTGCTACCAACAGTTGTGCATGGTTATCTACTGCTATTCTTGTCACCAACATGAGAAATTTCCCTGTCAGCAGAGGCACAGTTGCAGGAATCCTGAAAGGTTATTCTGGACTCAGTGCTGCAGTTTTTACTGAAATTTACAGCGTGGTTTTTCACAATTCTTCACCCGACTTCATGTTATTCCTTGCTATTGGTATTCCTGCTTTATGCTTCAGTACCATGTTTCTTGTTCGGCCTTGTACTCCTGCTTCTGGTGAAGATTCTTCTGAAAACGGGCATTTTCTGTTCATCCAAGGTGCTAGTGCAGCCTTGGGTTTATACTTACTTACAACAACAATACTCAACAACTTTGTCCCAATAAGTGATACAGTGTCATATGTTATGCTGGCGGTGATGATTCTCCTTCTCTTGGCTCCCCTTGCTATCCCTATAAAGATGACACTGTGTCCCAGAAAAGCATCTGCAACAACAGAAACACCAGAGGAACATGTTGGATCTTCTGACTTTCTGGTTCAAGATGGCAAGGTGGACAACATAGAGCCCTTGCTATCAGCTTCATCAGCCAGTGGCCTTGGAAGTTTTAATGATGTGGACGGTTCAGCTGAGGTGGCCATGCTTCTTGCTGAGGGTGAGGGGGCAGTGAGGAAGAAGAGAAGGCCCAAGAGAGGGGAAGATTTTAAGTTTACTGAGGCTCTAGTAAAAGCAGATTTCTGGCTACTGTTTTTTGTTTACTTTGTTGGTGTTGGAACCGGAGTTACTGTTCTCAATAACTTGGCTCAGATAGGCATTGCACAAGGTATTGAAGATACCACAATTTTGCTGTCACTATTCAGCTTTTTCAATTTTGTGGGTCGGCTTGGTGGAGGAGTTGTTTCAGAACATTTTGTCAGGACAAAAACGATTCCAAGGACAATTTGGATGACATGCACGCAGATAATTATGATCTTCTTGTACCTTCTGTTTGCCTATGCTATCAATGGAACCCTTTATCCGGCAATTGCTGTTCTTGGTATCTGCTATGGCGTGCAATTTTCCATAGTGATTCCCACTGTTTCGGAGCTTTTTGGATTGAAACACTTTGGTATGTTGAGCAACTTCATGGCTTTAGGGAACCCACTTGGTGCATTACTTTTCTCAGCTCTTCTAGCAGGACACATCTATGATAATGAGGCCACAAAGCAACATGGTGTAGGCCTCATTGCTTCAGGTGTTGCATGTATGGGTCCAAGTTGTTTTAAGCTAACCTTTTTGACTCTGGCTGGTGTGTGTGTCGCGGGTGCACTCTCCAGCATTATCTTGACTCTAAGAATTAAGCCCGTTTACCAAATGCTTTATTCCGGTGGTTCGTTTAAGCTACCTCAAGCTTCAGGCCACTAA 1719 0.4398 MLRVKEGKRPPWVGLGAAVWVQICSGNGYTFPLYSHSLKSVLGFNQSQITLLGVANDIGENVGILPGLACNKFPPWLILFIGGLLSLLGFGVLWLGITKTLDSVPFILLWLALAVATNSCAWLSTAILVTNMRNFPVSRGTVAGILKGYSGLSAAVFTEIYSVVFHNSSPDFMLFLAIGIPALCFSTMFLVRPCTPASGEDSSENGHFLFIQGASAALGLYLLTTTILNNFVPISDTVSYVMLAVMILLLLAPLAIPIKMTLCPRKASATTETPEEHVGSSDFLVQDGKVDNIEPLLSASSASGLGSFNDVDGSAEVAMLLAEGEGAVRKKRRPKRGEDFKFTEALVKADFWLLFFVYFVGVGTGVTVLNNLAQIGIAQGIEDTTILLSLFSFFNFVGRLGGGVVSEHFVRTKTIPRTIWMTCTQIIMIFLYLLFAYAINGTLYPAIAVLGICYGVQFSIVIPTVSELFGLKHFGMLSNFMALGNPLGALLFSALLAGHIYDNEATKQHGVGLIASGVACMGPSCFKLTFLTLAGVCVAGALSSIILTLRIKPVYQMLYSGGSFKLPQASGH 572
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g05025 572 Gene3D MFS general substrate transporter like domains 1 195 IPR036259 -
Spst3g05025 572 Gene3D MFS general substrate transporter like domains 317 526 IPR036259 -
Spst3g05025 572 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 12 556 - -
Spst3g05025 572 SUPERFAMILY MFS general substrate transporter 11 195 IPR036259 -
Spst3g05025 572 CDD MFS_Mch1p_like 10 541 - -
Spst3g05025 572 Pfam Nodulin-like 11 258 IPR010658 -
Spst3g05025 572 SUPERFAMILY MFS general substrate transporter 217 553 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g05025 Spst-Chr3 102052448 102054954 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst3g05025 2 572 Nodulin-like Gene Family AT1G80530 57.417 0.0 657
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g05025 - - gmx:100787328 961.059
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst3g05025 3 102052448 102054954 Spst3g05025 3 102052448 102054954 ECH
Spst3g05025 3 102052448 102054954 Spst9g02679 9 60863926 60866918 PCT