Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g04998 ATGGCTATTTTTGCGTTATTCTTGGTTCTATTGCTGCAATTGTCAACAATTTTTGGCTCTGAGGTTGTCTTACAGTCAAAGAATTGTGGCACTGATTGGGTGGCACATTCATATTCTAGTCATGGTCAGGAACTGTTCTACATAAACGGCAATGTAGTGAACAAGGTTGCTTTCTGTGAGGGTCTCCAATTGTATACTGAAAAGGGGTGTGATGTTAAGGACTACTTTGGAAGTGTCAAATGTGTGACGGAGGTTTCTTTTGTGGATTTGCCTTTAAAGGAAGGGAGGAAACTTCTGAAAAAGGATTCAGATAGTGAATCCACATCACAAGGAGATCCTAAGCCTCTGTCAGCTCACGTGGTTGGTATTTCTGCAGGGGGAGCTTTGTTTGTATGTTGCCTTGTTCTTTGTCCTTGTTTCTTTAGCAAGAGAAAGAAGGCAACTTCTCATGCTGTTCTTGCCAAGGACCCCAATTCAATGGATTCGGTTTCATCCTTTGAAGCCTCCGTCACTGAAAAGATTCCGGCCAGTCCACTTCGGGTGCCACCTAGTCCGTCAAGATTCTCAATGTCTCCAAAACTCAGTAGACTTCAATCATTGCATCTCAATCTGAACCAAATTACAAGAGCTACACATAACTTTTCAGAAACATTACAAATAGGAGAAGGGGGTTTTGGAACTGTCTACAAGGCCAAGTTGGATGATGGCCTGGTTGTGGCTGTAAAACGTGCAAAAAAGGAACATTTTGATAGTTTGAGAACAGAATTCAGCAGTGAAGTTGAACTTCTGGCCAAAATTGATCATCGAAACCTGGTGAAGCTACTAGGTTATATTGACAAAGGAAATGAACGCCTTCTTATTACAGAGTTTGTGCCAAATGGTACCCTTAGAGAACATTTGGATGGTATGCGTGGAAAAATACTAGACTTCAATCAGCGCCTTGAAATTGCAATTGATGTTGCCCATGGCTTGACCTATCTGCATCTTTATGCAGAAAAGCAAATTATACATCGAGATGTGAAATCATCCAACATTCTTCTGACAGAAAGCATGCGAGCTAAAGTTGCTGATTTTGGATTTGCAAGGCAAGGGCCGGTGAACACTGATCAGACACACATTTCTACCAAAGTGAAGGGAACAGTTGGTTATTTGGACCCTGAGTATATGAAAACATACCAACTCACTCCCAAGAGTGATGTTTACTCATTTGGAATTTTGCTTTTAGAAATTGTGACAGGTCGCCGTCCCGTTGAGTTGAAGAAAACTGTTGAAGAGCGGGTTACACTTAGATGGGCTTTCAGGAAGTACAATGAAGGAAGCGTAGTGGAGCTGGTGGATCCTTTAATGGAAGAAGCTGTAAATGGAGATGTTCTAATGAAGATGTTTGATTTGGCATTTCAATGCGCAGCTCCAATTAGAACAGATAGACCTGACATGAAATCAGTGGGCGAGCAATTGTGGGCAATAAGGGCAGATTACCTCAAGAGTGCAAGGAGAGAATAA 1503 0.4178 MAIFALFLVLLLQLSTIFGSEVVLQSKNCGTDWVAHSYSSHGQELFYINGNVVNKVAFCEGLQLYTEKGCDVKDYFGSVKCVTEVSFVDLPLKEGRKLLKKDSDSESTSQGDPKPLSAHVVGISAGGALFVCCLVLCPCFFSKRKKATSHAVLAKDPNSMDSVSSFEASVTEKIPASPLRVPPSPSRFSMSPKLSRLQSLHLNLNQITRATHNFSETLQIGEGGFGTVYKAKLDDGLVVAVKRAKKEHFDSLRTEFSSEVELLAKIDHRNLVKLLGYIDKGNERLLITEFVPNGTLREHLDGMRGKILDFNQRLEIAIDVAHGLTYLHLYAEKQIIHRDVKSSNILLTESMRAKVADFGFARQGPVNTDQTHISTKVKGTVGYLDPEYMKTYQLTPKSDVYSFGILLLEIVTGRRPVELKKTVEERVTLRWAFRKYNEGSVVELVDPLMEEAVNGDVLMKMFDLAFQCAAPIRTDRPDMKSVGEQLWAIRADYLKSARRE 500
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g04998 500 Pfam Protein tyrosine and serine/threonine kinase 219 486 IPR001245 GO:0004672|GO:0006468
Spst3g04998 500 CDD STKc_IRAK 220 486 - -
Spst3g04998 500 FunFam Calmodulin-binding receptor-like cytoplasmic kinase 3 291 500 - -
Spst3g04998 500 SMART serkin_6 214 488 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst3g04998 500 Gene3D Transferase(Phosphotransferase) domain 1 291 499 - -
Spst3g04998 500 SUPERFAMILY Protein kinase-like (PK-like) 196 489 IPR011009 -
Spst3g04998 500 ProSitePatterns Protein kinases ATP-binding region signature. 220 246 IPR017441 GO:0005524
Spst3g04998 500 FunFam Calmodulin-binding receptor-like cytoplasmic kinase 3 186 290 - -
Spst3g04998 500 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 100 489 - -
Spst3g04998 500 ProSiteProfiles Protein kinase domain profile. 214 488 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst3g04998 500 ProSitePatterns Serine/Threonine protein kinases active-site signature. 335 347 IPR008271 GO:0004672|GO:0006468
Spst3g04998 500 Gene3D Phosphorylase Kinase; domain 1 185 290 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g04998 Spst-Chr3 101743671 101747022 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst3g04998 120 489 Receptor kinase-like Gene Family AT3G46290 39.894 1.70e-74 249
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-IV Spst3g04998 PK_Tyr_Ser-Thr 6.1e-51 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g04998 - - gmx:100798260 888.641