Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Spst3g04972 | ATGAAAGTTGTGAGCATGGAGACGGAGAAGAAGTGCGGTTGCTGGGCTGTCCTTAAACGCGGCGTTAGAGGTGCGTGCAAACCTTCAGCTTCCAGAGACTCTGCTAACACTATCCCTCGTACTAGTCTCGTTTATGATGCAGCAACCGAGACAAGATACCTGAATGCTAGCAATCGAGAACTTTGTCCTCCCCTTGAAGCTCGTTTATCTTCTGATAATCCTGATCCCCCACCCCAGGAGAATAAGGCTCCTTGCCAGCTCCTTCAATTTACATTTCAAGAACTTAAAGCTGCGACTGGAAATTTCAGACCTGATAGCATTCTTGGGGAAGGTGGCTTTGGTTATGTTTTCAAAGGATGGATTGAGGAAGGTGGAACCTCGCCAGCTAAACCTGGGTCAGGGATTACAGTGGCTGTCAAAAGCTTGAAGCCAGACGGCCTTCAGGGCCATAGAGAATGGGTGGCTGAAGTTGACTTTCTTGGACAGCTTCACCATCCTAACCTTGTGAAACTTATCGGTTACTGCATTGAAGATGATCAGCGGCTTCTTGTTTATGAGTTTATGACCCGTGGAAGTCTAGAAAATCATCTATTCAGAAGAACCGTACCTCTCCCGTGGTCCAAAAGGGTTAAGATTTCCCTTGGTGCAGCAAAAGGATTGGCCTTCCTCCATAATGGTCCAGAACCAGTCATTTATAGAGATTTTAAAACATCTAACATTTTGCTTGATACGGAGTATAATGCGAAACTTTCAGATTTTGGTCTAGCAAAAGCAGGACCACAAGGAGATAAAACGCATGTTTCTACCAGAGTAGTTGGAACTTATGGTTATGCTGCTCCAGAATATGTCATGACAGGACACTTGACTGCTAAAAGTGATGTTTATAGCTTTGGAGTTGTGTTACTTGAGATACTAACAGGAAGAAGATCAATGGACAAGAAGCGCCCAAGTGGGGAACAAAATCTTGTTTCTTGGGCGAGGCCATACTTAGCTGACAAGCGAAAGCTGTACCAGCTTGTGGATCCTCGCCTCGAGCTAAATTATTCTCTAAAAGGAGTGCAGAAGATTTCCCAGTTAGCTTATAGTTGTCTTAGTAGAGACCCCAAATCTCGCCCCAATATGGATGAAGTTGTGAAAGCTCTGACTCCATTGCAGGATCTTAATGACCTTGCAATTTTGTCTTACCACTCTCGCTTGTCTCAACAAGGGAGACGAAAGAAGAAAGATGGAACTCCACATATCACATACACACAATCCAAGAGCATGAGGGCCTCTCCCTTGAATACCGGCAAGCAGCATCGATGA | 1305 | 0.449 | MKVVSMETEKKCGCWAVLKRGVRGACKPSASRDSANTIPRTSLVYDAATETRYLNASNRELCPPLEARLSSDNPDPPPQENKAPCQLLQFTFQELKAATGNFRPDSILGEGGFGYVFKGWIEEGGTSPAKPGSGITVAVKSLKPDGLQGHREWVAEVDFLGQLHHPNLVKLIGYCIEDDQRLLVYEFMTRGSLENHLFRRTVPLPWSKRVKISLGAAKGLAFLHNGPEPVIYRDFKTSNILLDTEYNAKLSDFGLAKAGPQGDKTHVSTRVVGTYGYAAPEYVMTGHLTAKSDVYSFGVVLLEILTGRRSMDKKRPSGEQNLVSWARPYLADKRKLYQLVDPRLELNYSLKGVQKISQLAYSCLSRDPKSRPNMDEVVKALTPLQDLNDLAILSYHSRLSQQGRRKKKDGTPHITYTQSKSMRASPLNTGKQHR | 434 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Spst3g04972 | 434 | FunFam | Serine/threonine-protein kinase BIK1 | 70 | 187 | - | - | |
Spst3g04972 | 434 | ProSitePatterns | Protein kinases ATP-binding region signature. | 108 | 140 | IPR017441 | GO:0005524 | |
Spst3g04972 | 434 | CDD | STKc_IRAK | 108 | 384 | - | - | |
Spst3g04972 | 434 | MobiDBLite | consensus disorder prediction | 414 | 434 | - | - | |
Spst3g04972 | 434 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 230 | 242 | IPR008271 | GO:0004672|GO:0006468 | |
Spst3g04972 | 434 | SUPERFAMILY | Protein kinase-like (PK-like) | 84 | 387 | IPR011009 | - | |
Spst3g04972 | 434 | FunFam | Probable serine/threonine-protein kinase PBL8 | 188 | 401 | - | - | |
Spst3g04972 | 434 | PANTHER | OS01G0588500 PROTEIN-RELATED | 83 | 385 | - | - | |
Spst3g04972 | 434 | Pfam | Protein tyrosine and serine/threonine kinase | 106 | 381 | IPR001245 | GO:0004672|GO:0006468 | |
Spst3g04972 | 434 | Gene3D | Transferase(Phosphotransferase) domain 1 | 188 | 398 | - | - | |
Spst3g04972 | 434 | Gene3D | Phosphorylase Kinase; domain 1 | 78 | 187 | - | - | |
Spst3g04972 | 434 | ProSiteProfiles | Protein kinase domain profile. | 102 | 399 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Spst3g04972 | 434 | MobiDBLite | consensus disorder prediction | 398 | 434 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Spst3g04972 | Spst-Chr3 | 101484656 | 101488238 | Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Spst3g04972 | 90 | 381 | Glycoside Hydrolase | AT3G07070 | 55.405 | 4.97e-110 | 328 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_RLCK-VIIa-2 | Spst3g04972 | PK_Tyr_Ser-Thr | 3.8e-49 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Spst3g04972 | - | - | aprc:113848012 | 857.825 |