Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g04964 ATGGTGCCCTTCAGTTTGATTTGGGAGGGTGTCAAGAATTTGGCTACCGATCATGCACCAGTGGTGCCCATTTCACTATTTGTGGCTGTTCTCTGTCTTTGCTTGGTCATTGGTCACATGCTTGAAGAGAATCGATGGGTTAATGAATCCATTGTTGCCATTATAGTAGGAATCATTGCTGGAATTATACTATTATTGGTCACCAAAGGAAAGAGTTCTCACATCCTTACATTTAATGAAGAACTATTCTTCATATATCTCCTTCCTCCCATAATATTCAATGCAGGATTTCAGGTGAAGAAGAAACAGTTCTTCCATAACTTTTTAACCATCATGTTGTTTGGTGTCATTGGTGTTTTTATTTCAACGTCTATTATTACTTGCGGCAGCTGGTGGATATTCCCCAAGTTGAAGTTGCTTGGCCTGAGTGGACAAGATTATCTTGCTATAGGAACAATTTTCTCATCAACGGACACAGTTTGTACACTGCAGGTTCTCCATCAAGATGAAACTCCTCTACTATACAGCTTAGTCTTTGGGGAAGGAGTGGTAAATGATGCCACCTCAGTTGTTCTCTTCAATGCAGTGCAAAAGCTTGATGTTACAAGATTTAGCAGCAAGACATTCCAAGTTATTGGAGATTTCTTCTATCTATTCGTGTCAAGCACTGGTCTTGGAGTTCTAGCTGGCCTTCTCACATCATATATCTTGAAAGCCTTATGCTTTGGAAGACATTCAAGTATTCGAGAAATTGCATTGATGTTGTTAATGGCATACCTGTCCTACATGTTGGCAGAGCTATTTGATCTAAGTGGAATCCTCACTGTTTTCTTTTCTGGAATACTAATGTCACATTATGCATGGTATAATGTGACTGAAACTTCAAGAATCACAACCAGAAATGTGTTTGCGACAATGTCATTTATTGCAGAAACCTTCATATTTCTATATGTGGGCATGGACGCCCTAGACATTGAGAAGTGGAAGATGACTCAATTAAGTTTTGGAAATTTGCTGGGGATATACAGTTCCTTAATCCTATTGATATTGCTTGGGCGCGCAGCATTTGTGTTCCCTCTCTCTGCTCTTGCCAATTATACGAACACACGTGCTGCTTCTGACCAAGCATCAAGCATCACTTTCAAACATCAGATAATCATTTGGTGGGCTGGACTAATAAGGGGAGCTGTCTCTATTGCTCTGGCTTTCAAACAGTTTACATATTCTGGAGTTACTTCTGATCCAGTTAATGCAACAATGATTACCAACACCATTATTGTTGTCCTTTTCAGCACACTGGTGTTTGGTTTTTTCACAAAACCACTAATCAGATATCTGCTACCCCACACGGCTACAAGGAAAAACATCATCCATGAAGAGTCAGGTCCACCAGTTGAGGACTTAAATCTACCTTTGCTATCTCTTGATGAGTCAGCAGCAACCAACATCAGCCGCGCAAAGGAAAGTTTATCCATGTTATTAGAAAGTCCTGTCTTCACCATACATCACTATTGGAGGAGGTTCGATGATGCTTACATGAGACCCTTTTTTGGGGGACCTCATCATAATGGGTCAGAGTGCTAG 1584 0.4047 MVPFSLIWEGVKNLATDHAPVVPISLFVAVLCLCLVIGHMLEENRWVNESIVAIIVGIIAGIILLLVTKGKSSHILTFNEELFFIYLLPPIIFNAGFQVKKKQFFHNFLTIMLFGVIGVFISTSIITCGSWWIFPKLKLLGLSGQDYLAIGTIFSSTDTVCTLQVLHQDETPLLYSLVFGEGVVNDATSVVLFNAVQKLDVTRFSSKTFQVIGDFFYLFVSSTGLGVLAGLLTSYILKALCFGRHSSIREIALMLLMAYLSYMLAELFDLSGILTVFFSGILMSHYAWYNVTETSRITTRNVFATMSFIAETFIFLYVGMDALDIEKWKMTQLSFGNLLGIYSSLILLILLGRAAFVFPLSALANYTNTRAASDQASSITFKHQIIIWWAGLIRGAVSIALAFKQFTYSGVTSDPVNATMITNTIIVVLFSTLVFGFFTKPLIRYLLPHTATRKNIIHEESGPPVEDLNLPLLSLDESAATNISRAKESLSMLLESPVFTIHHYWRRFDDAYMRPFFGGPHHNGSEC 527
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g04964 527 PRINTS Na+/H+ exchanger signature 82 93 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016020|GO:0055085
Spst3g04964 527 PRINTS Na+/H+ exchanger signature 111 119 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016020|GO:0055085
Spst3g04964 527 PRINTS Na+/H+ exchanger signature 96 110 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016020|GO:0055085
Spst3g04964 527 PRINTS Na+/H+ exchanger signature 151 161 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016020|GO:0055085
Spst3g04964 527 Pfam Sodium/hydrogen exchanger family 28 443 IPR006153 GO:0006812|GO:0015297|GO:0016020|GO:0055085|GO:1902600
Spst3g04964 527 Gene3D - 143 195 - -
Spst3g04964 527 PANTHER SODIUM/HYDROGEN EXCHANGER 16 517 IPR018422 GO:0006812|GO:0015385|GO:0016020|GO:1902600
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g04964 Spst-Chr3 101365159 101369330 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst3g04964 12 527 Antiporters AT5G55470 71.209 0.0 755
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g04964 - - gmx:100813332 911.753