Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g04956 ATGGCTGGAGTGCTACTAAAGACCACAAAAGCTGAAGATTACGAGGTGGGGAGTACCATAGGTTGGCTTAGTTTTCCTCCTAGCGGTGCTTCTTTTTATTCCAAATGGGCTTCAAATTTTACATTCAAAGTAAATGACACTCTGGTGTTCAACTTCGAATCTGGAAGCCACAGTGTGGTGGAACTTACCAAGGCTAGCTATGAAAAGTGTAATTTCGGAAACATTATCAAATCCTTCAATACAGGACCAGCTAGAGTCACCCTCACAAGCCCAGGAGAATTCTACTTTTCCTGCCCCTTCTCAGGCCATTGCAGCAGTGGCCAAAAGCTAAGCATTAAAGTCACTGACTCTTCTTCACCAGCACCACAGAAAGCTCCAACTCAAGGTCCTTCAACTTCCCCTGCATCAAACAATGCTCCAGTTGAAGGTCCTTCATCTTCTTCTCCCCCCGCATCTGGTTCAGTTCCTAGTTCAGGTTCCTCTGAAATAACCCCGTCACCCCAAACTGATTCAGCTGCTATAGCCCCTCCACCACAGGGCTCAGCCACACCTCTGGCTGCTACCTACTCTCTATTCATCATCACCATTGTCATCAATTTTCTGTCTCAATTTTAG 615 0.4602 MAGVLLKTTKAEDYEVGSTIGWLSFPPSGASFYSKWASNFTFKVNDTLVFNFESGSHSVVELTKASYEKCNFGNIIKSFNTGPARVTLTSPGEFYFSCPFSGHCSSGQKLSIKVTDSSSPAPQKAPTQGPSTSPASNNAPVEGPSSSSPPASGSVPSSGSSEITPSPQTDSAAIAPPPQGSATPLAATYSLFIITIVINFLSQF 204
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g04956 204 PANTHER BLUE COPPER PROTEIN 13 131 IPR039391 GO:0009055
Spst3g04956 204 SUPERFAMILY Cupredoxins 11 114 IPR008972 -
Spst3g04956 204 MobiDBLite consensus disorder prediction 112 180 - -
Spst3g04956 204 CDD Stellacyanin 12 114 - -
Spst3g04956 204 ProSiteProfiles Phytocyanin domain profile. 12 116 IPR003245 GO:0009055
Spst3g04956 204 MobiDBLite consensus disorder prediction 112 176 - -
Spst3g04956 204 FunFam Blue copper 10 120 - -
Spst3g04956 204 Gene3D - 11 127 IPR008972 -
Spst3g04956 204 Pfam Plastocyanin-like domain 31 108 IPR003245 GO:0009055
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g04956 Spst-Chr3 101271757 101272528 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst3g04956 3 157 Phytocyanin Superfamily AT5G53870 37.195 2.50e-24 96.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g04956 - - pvu:PHAVU_003G166600g 290.041
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst3g04956 3 101271757 101272528 Spst3g04956 3 101271757 101272528 ECH