Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g04934 ATGGGCCAGAGTAGTGCGGTGCTAGATTCTGTCCAAAGAGGAAGAGAAGTAGTGAAGATTAGTGTTAGTAGATATGAAGATTTCTTTTCCCCTCTAATACCCAACAGGAAAGAGGTTGATTGCAGTGAAGAGGCTAGAGAAGTTAGTGGAAAGTTCCAAGCAGAAACGAGAGTCATTGGAAAAGCACACCATAGTTATTTAGTTCGTTTGTTGGGTTTCTGTGAGGAGGGTTCTATAAGACTTCTGGTGTATGAATACATGTCCAATGGCTCCCTTGGAAACCTTATCTTTGTGGCTCAAGCAAAACTTCTCATGCCCGATCAAACTAGAACCGTGACAGTGGTCAGGGGGACAAGAGGGTATCTGGCCCCTGAATGGAACAAGAATGTCCCCATATCTGTCAAGGCTGATGTTTATAGCTACGGAATAGTGTTGGAAATTTTATGTTGCAGAAGAAGCATGGAAGTTTATGCCTCCGAACCTGAGGCGGTTCTTCTCTCCGGATGGGCTTATAAGTGTTTTATTACCGGAAAACTTAATAAGCTTTGTACTTGGGAAGTCGTGAATGATAAAACTGCAGTGGAAAGTATGGTTAAAGTGGCACTTTGGTGTATCCAAGATGAACCTTATCTGCGTCCAACAATGAAGAGTGTGGTGTTGATGTTAGAAGGGGTCACAGACATAGCAATTCCTCCTTCTCCCGCTTCTGATTCTACTTGA 720 0.4319 MGQSSAVLDSVQRGREVVKISVSRYEDFFSPLIPNRKEVDCSEEAREVSGKFQAETRVIGKAHHSYLVRLLGFCEEGSIRLLVYEYMSNGSLGNLIFVAQAKLLMPDQTRTVTVVRGTRGYLAPEWNKNVPISVKADVYSYGIVLEILCCRRSMEVYASEPEAVLLSGWAYKCFITGKLNKLCTWEVVNDKTAVESMVKVALWCIQDEPYLRPTMKSVVLMLEGVTDIAIPPSPASDST 239
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g04934 239 Gene3D Transferase(Phosphotransferase) domain 1 94 231 - -
Spst3g04934 239 Gene3D Phosphorylase Kinase; domain 1 34 88 - -
Spst3g04934 239 SUPERFAMILY Protein kinase-like (PK-like) 46 228 IPR011009 -
Spst3g04934 239 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5 46 97 - -
Spst3g04934 239 Pfam Protein kinase domain 109 219 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst3g04934 239 Pfam Protein tyrosine and serine/threonine kinase 47 108 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g04934 Spst-Chr3 101003714 101005938 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst3g04934 51 224 Receptor kinase-like Gene Family AT5G16000 30.043 2.23e-21 90.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Spst3g04934 Pkinase 1.5e-08 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g04934 - - gmx:100815958 232.261