Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g04900 ATGCTAGAGAGGAACTCCTCCGTACACAGGCAATTTGTCACCCCGCGAAGGTCACCCAGGTTCCTCCCCCAACAAAACAACACCACTCCCAACCCCAAATCTGCCAAACACACCGTTTCCAAAAAGGAATCCAATGAGTTTACGGTGGGGCCGAGAAGGTCTTCGCGGCTGAACAATGGGGACGTTGGGTTTTCATCTCTTAGACGATCTCCCAGGTTCAACAACGAGTCAAGCGGTAAGAAAGTGAAGAACACGAGTGTGAAGGGTGGTGACGCTGAAACGAAGGAAAATTGTGTCGTTTCAGATGAGGGGTTCGGTGGAGGAAGAAAGAAAGAGAGAAAGGAGAAGAGGGCTGAAGTTAAAAAGCAAAAAAATCATGTCGTTTCAGATGAAGGGATTGGTGGGGGTGCAAAGAAGGGGGGTGATGGGAAGAAGGTTGAAGTTGAAATTACCAGAAATGGTGTCGTTTCGAATGGGGGTGCTGGTGGAGGAAGACGTAAGGGTGGAAATGGAGAGATCGTTGAAGTTAAAACAAAAGAAAATCGTGTTGTTTGTGATAAGGATTTTGATGGAGAAAGAAAGAAGATTGAAGATGGAGACAAGAGAAAGCGCAAAGGCGATGAAGTTAGGGAAGGGTGGACGAAGGAACAAGATTTAGCTCTTCAGAGAGCGTATCTCATGGCAAAGCCTAGCCCCCATTTCTGGAAGAACGTTTCCAAACTGGTATGCATCCTTCTCTCTCGGTATGCAGTTGTAAATATTGACTTTTGGTTTGACTTCAACATGGAACAAACTGACAGTTATCAGGTGCCTGGAAAGTCTCAACAGGAATGCTTTGATAGAATTCACTTTGACCATGTGACTCCACTTCAACCACAGCCTCGATCAAGGGCAAAGACATTGAAGTCATCACCCATTCACGATTTTTCTTTATCTGAAAGTAAACTTCTCAACCCTATTGATACAACAGTTCGAAGATTAAATGTTCTAAAACCAAAGAACATTATTACCCAGAAGTCAGTTGAAAAGCTGTTACAATGGCATCTTGAAGGTGATCTAGACCGTGAAGGGGACATATTTTCTGTTCTTGAACCGAACATAGATTTCTCCACTAATGCTTCCCAGCCTAGTGAAGCTCTTTCTACTCCAAAGCAGCTAAAGGAAAACAAAGGGTGCCTGCAAAGTTGTACCGAAACATCATCTTCAAGTGGTAAGAAGCCACTTTCAAGATTTAGTGGCTCGCACATTACAGATCTTGTTAGTCCTCCTGTACTAAAGAAAGTAAAGAACAGGGTATTGCATGAGAAATATGTCAATCAATTGCGCTGTAGGGAATCTAGGAGAAGAGCAGCCTCTATGAAGATAATTGGTGAAGGAGGAAGCACTAAGAAAAAGGATGCAGTTAAAGCTGCAAAAGTTGCATTGGTTTCTGAAGCTAGAGATGCTATCAATAAATTTCGAGAGTCGCAAGTCAATTTCATGGACAACGCCTTTACTTCTGATGGAGATAACGATGATAACATTGAATTTGAAGATGAACGAACAGGTGCTTATGGAAGTGTGTACAAGGCACAACTTCCCAGTGGCAGAATTGTTGCACTGAAAAAGCTTCACAAAGCAGAATCTGAAAATCCATCCTTTTACAAGAGCTTTTGCAACGAGACCCAGATCTTGACAGAAATTCGCCATCGTAACATCATTAAGCTTTATGGCTTTTGTTTGCATAACAAGTGTATGTTTTTGGTGTATGAGTATATGGAAAGGGGAAGCTTGTTTTGCAACTTGTCTTATGATGTGGAAGCTCAAGAGCTGAATTGGAGAAAGAGGATAAATATTGTTAAAGGGATAGCCTATGGCTTGGAGTTCAGGATGATCGATCAGAATACATTTATGACCGATCAGAGTAAGATATGA 1914 0.4232 MLERNSSVHRQFVTPRRSPRFLPQQNNTTPNPKSAKHTVSKKESNEFTVGPRRSSRLNNGDVGFSSLRRSPRFNNESSGKKVKNTSVKGGDAETKENCVVSDEGFGGGRKKERKEKRAEVKKQKNHVVSDEGIGGGAKKGGDGKKVEVEITRNGVVSNGGAGGGRRKGGNGEIVEVKTKENRVVCDKDFDGERKKIEDGDKRKRKGDEVREGWTKEQDLALQRAYLMAKPSPHFWKNVSKLVCILLSRYAVVNIDFWFDFNMEQTDSYQVPGKSQQECFDRIHFDHVTPLQPQPRSRAKTLKSSPIHDFSLSESKLLNPIDTTVRRLNVLKPKNIITQKSVEKLLQWHLEGDLDREGDIFSVLEPNIDFSTNASQPSEALSTPKQLKENKGCLQSCTETSSSSGKKPLSRFSGSHITDLVSPPVLKKVKNRVLHEKYVNQLRCRESRRRAASMKIIGEGGSTKKKDAVKAAKVALVSEARDAINKFRESQVNFMDNAFTSDGDNDDNIEFEDERTGAYGSVYKAQLPSGRIVALKKLHKAESENPSFYKSFCNETQILTEIRHRNIIKLYGFCLHNKCMFLVYEYMERGSLFCNLSYDVEAQELNWRKRINIVKGIAYGLEFRMIDQNTFMTDQSKI 637
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g04900 637 MobiDBLite consensus disorder prediction 50 84 - -
Spst3g04900 637 SUPERFAMILY Protein kinase-like (PK-like) 515 622 IPR011009 -
Spst3g04900 637 Gene3D Transferase(Phosphotransferase) domain 1 502 624 - -
Spst3g04900 637 MobiDBLite consensus disorder prediction 105 128 - -
Spst3g04900 637 ProSiteProfiles Protein kinase domain profile. 507 637 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst3g04900 637 MobiDBLite consensus disorder prediction 1 144 - -
Spst3g04900 637 PANTHER LEUCINE RICH REPEAT KINASE 2 365 623 - -
Spst3g04900 637 Pfam Protein kinase domain 516 622 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst3g04900 637 MobiDBLite consensus disorder prediction 1 35 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g04900 Spst-Chr3 100774533 100783776 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst3g04900 515 627 Receptor kinase-like Gene Family AT4G08850 53.448 7.77e-29 120
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Spst3g04900 Pkinase 4.3e-16 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g04900 - - pvu:PHAVU_002G142700g 634.024