Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g04887 ATGAATGCTCCTACCACTGTAACCGCCATCACCACCACCACTCCGTCTAGGGATGAGCCTGACTATGACAGCAGCTCCTCCTCCATCACGGTGCCGGAATCCACCCGGAGCTGGATGACCAACCTCAGCTTCGGCAGCCGCCGCCGCCGTAGCTCGGTCTCTGTCTGCTCCTCCACCGTGGAGAGTCCTCACGCCAGGCCCCACAAGGCCAACCAGGCTGCATGGGAGGTCATGCGGCGGCTCCGGCGGGACAAGGGGCAGGTGGGGCTGGAGCACTTTCGGCTGCTGCGGCGGCTGGGAAGCGGCGACATCGGGAACGTGTACCTTTGCCAGATAAGGAACCCCGTGGTGGGGTTGCCGCAGTGCTTTTACGCGATGAAGGTGGTGGACAGAGAGGCACTTGCGATAAGGAAGAAGCTGCAGCGAGCGGAGATGGAGAAGGAGATTCTGGCCATGCTTGATCATCCCTTCTTACCTACCTTGTACACTGAGTTTGATGCTTCTCATTACTCTTGCTTGGTCATGGAGTTCTGCCCCGGTGGTGACTTGTATGCTGCACGCCAACGCCAGCCCGGGAAGCGCTTTTCCATAACATCCACTAAGTTTTATGCGGCTGAGACGCTATTGGCATTAGAGTATCTTCACATGATGGGCATAGTGTACAGGGATTTGAAGCCAGAGAATGTGCTTGTGAGGGAGGATGGACACATTATGCTTTCAGACTTTGATCTTTCGCTCAAATGTGACGTTGTTCCCAAGCTGTTAAGAAGTAAGACGAGAGTAGAACGCAGTATCAAGAGTACAAAGAGATCTGTACCAGCCTGCACTGCCCCCATGCAGCCTGTGCTGTCATGTTTCTTGGCATCAAGCAAGAAAAAGAAAGCGACTGTGACAACAGTTATAAGGGAAAATGTTGAGGTGGAAGAGCTTGATCCGGAGCTGGTGGCTGAGCCTATTGATGCCAAGTCCAAGTCATTTGTCGGGACACATGAGTACTTGGCCCCAGAAGTGATCTTGGGGCAAGGACATGGGAGTGCAGTGGACTGGTGGACGTTTGGGGTGTTCTTGTATGAGATGTTATACGGGAGAACACCCTTCAAAGGTGAAAATAATGAAAAAACTCTCGTCAACATTTTGAAGCAGCCCTTGGCTTTCCCTAGAATTGCAGTTAGCAGCAGCAAGGATTATGAAGAGATGGTGAAAGTTCAAGACCTTATAAGCAAGCTTTTGGTGAAGAATCCAAATAAGAGAATTGGAAACTGCATGGGTTCTGTAGAGATCAAAAGGCATGAGTTCTTCAAGGGTGTAAATTGGGCCTTAATTAGATCAGTTAGGCCCCCTGAGGTCCCTAGTGATGTGAACAAAATTAGGAGTAGGGTTTTACTACCAAAACTAAGCAAAACAGACAGGGATCAGCCATATCAGCCTAGAACTCAACACTTCGAATACTTCTAA 1455 0.5065 MNAPTTVTAITTTTPSRDEPDYDSSSSSITVPESTRSWMTNLSFGSRRRRSSVSVCSSTVESPHARPHKANQAAWEVMRRLRRDKGQVGLEHFRLLRRLGSGDIGNVYLCQIRNPVVGLPQCFYAMKVVDREALAIRKKLQRAEMEKEILAMLDHPFLPTLYTEFDASHYSCLVMEFCPGGDLYAARQRQPGKRFSITSTKFYAAETLLALEYLHMMGIVYRDLKPENVLVREDGHIMLSDFDLSLKCDVVPKLLRSKTRVERSIKSTKRSVPACTAPMQPVLSCFLASSKKKKATVTTVIRENVEVEELDPELVAEPIDAKSKSFVGTHEYLAPEVILGQGHGSAVDWWTFGVFLYEMLYGRTPFKGENNEKTLVNILKQPLAFPRIAVSSSKDYEEMVKVQDLISKLLVKNPNKRIGNCMGSVEIKRHEFFKGVNWALIRSVRPPEVPSDVNKIRSRVLLPKLSKTDRDQPYQPRTQHFEYF 484
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g04887 484 Pfam Protein kinase domain 94 248 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst3g04887 484 Pfam Protein kinase domain 322 433 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst3g04887 484 FunFam protein kinase PINOID 178 246 - -
Spst3g04887 484 CDD STKc_phototropin_like 92 450 - -
Spst3g04887 484 SMART serkin_6 93 433 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst3g04887 484 PANTHER FLIPPASE KINASE 1-RELATED 27 454 - -
Spst3g04887 484 MobiDBLite consensus disorder prediction 1 31 - -
Spst3g04887 484 Gene3D Transferase(Phosphotransferase) domain 1 320 451 - -
Spst3g04887 484 ProSitePatterns Serine/Threonine protein kinases active-site signature. 219 231 IPR008271 GO:0004672|GO:0006468
Spst3g04887 484 Gene3D Phosphorylase Kinase; domain 1 91 177 - -
Spst3g04887 484 Gene3D Transferase(Phosphotransferase) domain 1 178 247 - -
Spst3g04887 484 FunFam serine/threonine-protein kinase D6PK-like 321 451 - -
Spst3g04887 484 FunFam protein kinase PINOID 2 91 177 - -
Spst3g04887 484 ProSiteProfiles Protein kinase domain profile. 93 433 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst3g04887 484 Coils Coil 126 146 - -
Spst3g04887 484 SUPERFAMILY Protein kinase-like (PK-like) 75 458 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g04887 Spst-Chr3 100674202 100676072 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst3g04887 18 484 AGC Kinase Gene Family AT2G26700 57.905 0.0 575
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Spst3g04887 Pkinase 1.3e-31 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g04887 K08286 - gmx:100777988 879.396
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst3g04887 3 100674202 100676072 Spst3g04887 3 100674202 100676072 ECH
Spst3g04887 3 100674202 100676072 Spst9g02521 9 59044871 59046333 PCT