Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g04878 ATGGAGGGCCTCTTCTCCTCCCTCAAGCTTCTCTCCCTCTCCTTCATGCTCCTTCTCTTCCTCCTCAAGCTCACCGTCCTCCTCTGGTGGCGCCCCAGAAAAATTGAAGGCCACTTCTCCAAGCAAGGCATCAGAGGACCCCCTTATCGTTTCTTCATTGGAAACGTTAAGGAACTTGTCGGCATGATGTTGAAGGCCTCTTCCAAACCCATGCCTTTCTCTCACAACATTCTCCCCAGAGTCCTCTCCTTCTACCACCACTGGAAGAAAATTTACGGTGCAACATTCCTAGTTTGGTTTGGACCCACCGTTCGCCTCACCGTCTCTGATCCAGACCTCATTCGGGAAATCTTCACATCCAAGTCAGAACTTTACGAGAAAAACGAAGCTCCACCCCTTGTGAAGCAGCTAGAAGGTGATGGCCTCCTTAGCCTCAAAGGAGAAAAATGGGCTCACCACCGAAGAATTATCTCTCCCACATTTCACATGGAGAATCTCAAATTGCTGATACCGGTGATGGCAACAAGCGTGGTTGAGATGTTGGAAAAGTGGTCGGCAATGGGTGAGAAGGGTGAGGTGGAAGTCGAAGTTTCGGAGTGGTTTCAAAGCCTAACAGAGGATGTGATAACGAGGACGGCATTCGGAAGCAGCTACGAAGATGGGAAAGCCATTTTCCGCTTACAAGGGCAACAAATGGACTTGGCTGCGGATGCCTTCCAGAAAGTATTCATTCCGGGTTACAGATTTTTGCCGACGAGGAGGAATATAAAATCATGGAAACTGGAGAAGGAGATAAAGAAATCGCTGGTGAAGCTGATAGAGAGAAGGAGGGAGAATTCGGAGAGGGTGGAGAAGGGGGCAAAGGATTTGTTGGGGCTAATGATTGATGCGTCCAAGATGAATTCGAGGAATGTGACAGTGGATGACATTGTGGAAGAGTGCAAGAGCTTTTTCTTTGCAGGGAAACAGACCACATCCAACCTGCTGACGTGGACGACCATTCTCCTAGCTATGCACCCACACTGGCAGGTACAGGCACGTGAGGAGGTTCTCAAGATGTGTGGATCACGTGACCTTCCCACCAAAGACCATGTTGCAAAGCTCAGGACGGTGAGCATGATTGTGAACGAGTCGCTGAGGCTGTACCCGCCGACCATCGCGACAATCAGACGGGCAAAAGGGGACGTGGAGTTGGGGGGGTACAAGATACCACGTGGGACGGAGCTGTTGATTCCAATCCTGGCCGTTCATCACGATCAAGCGATATGGGGAAATGATGCGAACGAGTTCAATCCAGGGCGTTTCAGCTCGGGGGTGGCCCGCGCGGCGAAGCATCCTTTGGGGTTCATACCGTTTGGGGTGGGTGTGCGCACATGTATCGGACAAAACCTGGCAGTGCTACAAACCAAACTGGCCCTCGCAATCATACTCCAGCGTTTTAGTTTCAGGTTGGCCCCTAGTTATCAGCACGCACCAACGGTCCTCATGCTACTCTACCCTCAGTACGGCGCACCAATCATTTTCCAACACTTGTCGTCCACACTCCATCATCCTCACCCTCTTCACCACTCCTAG 1575 0.5117 MEGLFSSLKLLSLSFMLLLFLLKLTVLLWWRPRKIEGHFSKQGIRGPPYRFFIGNVKELVGMMLKASSKPMPFSHNILPRVLSFYHHWKKIYGATFLVWFGPTVRLTVSDPDLIREIFTSKSELYEKNEAPPLVKQLEGDGLLSLKGEKWAHHRRIISPTFHMENLKLLIPVMATSVVEMLEKWSAMGEKGEVEVEVSEWFQSLTEDVITRTAFGSSYEDGKAIFRLQGQQMDLAADAFQKVFIPGYRFLPTRRNIKSWKLEKEIKKSLVKLIERRRENSERVEKGAKDLLGLMIDASKMNSRNVTVDDIVEECKSFFFAGKQTTSNLLTWTTILLAMHPHWQVQAREEVLKMCGSRDLPTKDHVAKLRTVSMIVNESLRLYPPTIATIRRAKGDVELGGYKIPRGTELLIPILAVHHDQAIWGNDANEFNPGRFSSGVARAAKHPLGFIPFGVGVRTCIGQNLAVLQTKLALAIILQRFSFRLAPSYQHAPTVLMLLYPQYGAPIIFQHLSSTLHHPHPLHHS 524
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g04878 524 Gene3D Cytochrome P450 29 511 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst3g04878 524 SUPERFAMILY Cytochrome P450 39 508 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst3g04878 524 PANTHER CYTOCHROME P450 FAMILY MEMBER 22 504 - -
Spst3g04878 524 Pfam Cytochrome P450 82 491 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst3g04878 524 PRINTS E-class P450 group I signature 309 326 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst3g04878 524 PRINTS E-class P450 group I signature 329 355 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst3g04878 524 PRINTS E-class P450 group I signature 89 108 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst3g04878 524 PRINTS E-class P450 group I signature 204 222 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst3g04878 524 PRINTS E-class P450 group I signature 459 482 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst3g04878 524 PRINTS E-class P450 group I signature 449 459 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst3g04878 524 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 452 461 IPR017972 GO:0005506|GO:0016705
Spst3g04878 524 PRINTS P450 superfamily signature 320 337 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst3g04878 524 PRINTS P450 superfamily signature 373 384 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst3g04878 524 PRINTS P450 superfamily signature 450 459 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst3g04878 524 PRINTS P450 superfamily signature 459 470 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst3g04878 524 CDD CYP734 82 505 - -
Spst3g04878 524 FunFam Cytochrome P450 734A1 29 512 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g04878 Spst-Chr3 100565649 100568739 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst3g04878 9 513 Cytochrome P450 AT2G26710 78.516 0.0 834
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g04878 K15639 - gmx:100780027 912.909
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst3g04878 3 100565649 100568739 Spst3g04878 3 100565649 100568739 ECH